The 2.0 version of rSNPBase

Variant report

Variant rs55653318
Chromosome Location chr12:32799827-32799828
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:78 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:32755400-32800600 Strong transcription Monocytes-CD14+_RO01746 blood
2 chr12:32758600-32800400 Strong transcription HSMM muscle
3 chr12:32772600-32800000 Strong transcription Muscle Satellite Cultured Cells --
4 chr12:32777000-32800200 Strong transcription Primary neutrophils fromperipheralblood blood
5 chr12:32778800-32800400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr12:32779600-32800400 Weak transcription Small Intestine intestine
7 chr12:32782000-32810600 Weak transcription Placenta Amnion Placenta Amnion
8 chr12:32791200-32800200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
9 chr12:32793600-32800000 Weak transcription Esophagus oesophagus
10 chr12:32793600-32800400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
11 chr12:32793600-32800400 Weak transcription Gastric stomach
12 chr12:32793600-32800600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
13 chr12:32793600-32800600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
14 chr12:32793600-32800800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
15 chr12:32793600-32800800 Weak transcription Brain Inferior Temporal Lobe brain
16 chr12:32793600-32800800 Weak transcription Spleen Spleen
17 chr12:32793600-32801200 Weak transcription Pancreas Pancrea
18 chr12:32793600-32801400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr12:32793600-32801400 Weak transcription Fetal Intestine Small intestine
20 chr12:32793600-32802600 Weak transcription Right Ventricle heart
21 chr12:32793600-32802800 Weak transcription Lung lung
22 chr12:32793600-32804400 Weak transcription Stomach Mucosa stomach
23 chr12:32793600-32810400 Weak transcription Fetal Muscle Leg muscle
24 chr12:32793600-32810800 Weak transcription Ovary ovary
25 chr12:32793600-32812800 Weak transcription Aorta Aorta
26 chr12:32793600-32813000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
27 chr12:32793600-32819600 Weak transcription ES-I3 Cell Line embryonic stem cell
28 chr12:32793800-32800800 Weak transcription Brain Angular Gyrus brain
29 chr12:32793800-32800800 Weak transcription Fetal Brain Female brain
30 chr12:32793800-32801000 Weak transcription Colonic Mucosa Colon
31 chr12:32793800-32801200 Weak transcription Brain Hippocampus Middle brain
32 chr12:32793800-32802800 Weak transcription Placenta Placenta
33 chr12:32793800-32803600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr12:32793800-32803800 Weak transcription HepG2 liver
35 chr12:32793800-32810400 Weak transcription Brain Cingulate Gyrus brain
36 chr12:32794000-32803200 Weak transcription Sigmoid Colon Sigmoid Colon
37 chr12:32794000-32803600 Weak transcription NH-A brain
38 chr12:32794800-32801600 Weak transcription iPS-15b Cell Line embryonic stem cell
39 chr12:32794800-32802400 Weak transcription H1 Cell Line embryonic stem cell
40 chr12:32794800-32803400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr12:32794800-32812200 Weak transcription Skeletal Muscle Male skeletal muscle
42 chr12:32795400-32802000 Weak transcription Rectal Mucosa Donor 29 rectum
43 chr12:32795800-32802200 Weak transcription HSMMtube muscle
44 chr12:32796000-32801000 Weak transcription Primary B cells from cord blood blood
45 chr12:32796000-32801200 Weak transcription HUES6 Cell Line embryonic stem cell
46 chr12:32796000-32801600 Weak transcription Duodenum Smooth Muscle Duodenum
47 chr12:32796000-32803200 Weak transcription Stomach Smooth Muscle stomach
48 chr12:32796000-32803400 Weak transcription HMEC breast
49 chr12:32796000-32810400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
50 chr12:32796200-32803000 Weak transcription HUVEC blood vessel

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Last update: Aug 31, 2015