Variant report

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10452173	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11941794	0.87[EUR][1000 genomes]
rs17026587	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs55649133	0.87[EUR][1000 genomes]
rs56403113	0.87[EUR][1000 genomes]
rs59643119	0.85[EUR][1000 genomes]
rs61220489	0.87[EUR][1000 genomes]
rs66604908	0.87[EUR][1000 genomes]
rs6837816	0.87[EUR][1000 genomes]
rs72674088	0.86[EUR][1000 genomes]
rs72674090	0.87[EUR][1000 genomes]
rs72674091	0.87[EUR][1000 genomes]
rs72674093	0.87[EUR][1000 genomes]
rs72676503	0.87[EUR][1000 genomes]
rs72676512	0.87[EUR][1000 genomes]
rs72676517	0.87[EUR][1000 genomes]
rs72676518	0.87[EUR][1000 genomes]
rs72676537	0.87[EUR][1000 genomes]
rs72676538	0.87[EUR][1000 genomes]
rs72676541	0.87[EUR][1000 genomes]
rs72676554	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72676562	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72676566	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7679904	0.93[ASN][1000 genomes]
rs7696037	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv879640	chr4:97711707-98697586	Active TSS Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:98157200-98159200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr4:98157400-98160000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr4:98157400-98160600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived

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