Variant report
| Variant | rs55753709 |
|---|---|
| Chromosome Location | chr10:96029170-96029171 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr10:95974200-96034000 | Weak transcription | Colon Smooth Muscle | Colon |
| 2 | chr10:95985800-96033800 | Weak transcription | Left Ventricle | heart |
| 3 | chr10:95994600-96045400 | Weak transcription | Lung | lung |
| 4 | chr10:95995800-96051800 | Weak transcription | Fetal Kidney | kidney |
| 5 | chr10:96004400-96034000 | Weak transcription | Fetal Brain Male | brain |
| 6 | chr10:96005000-96031200 | Weak transcription | Brain Germinal Matrix | brain |
| 7 | chr10:96006600-96030200 | Weak transcription | Gastric | stomach |
| 8 | chr10:96006600-96030200 | Weak transcription | Ovary | ovary |
| 9 | chr10:96006600-96033600 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 10 | chr10:96012600-96030600 | Weak transcription | Stomach Mucosa | stomach |
| 11 | chr10:96012800-96030600 | Weak transcription | Spleen | Spleen |
| 12 | chr10:96013200-96034000 | Weak transcription | Adipose Nuclei | Adipose |
| 13 | chr10:96013600-96034000 | Weak transcription | Rectal Smooth Muscle | rectum |
| 14 | chr10:96014000-96030000 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 15 | chr10:96014000-96034000 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 16 | chr10:96014400-96030800 | Weak transcription | Placenta | Placenta |
| 17 | chr10:96015000-96070200 | Weak transcription | Fetal Brain Female | brain |
| 18 | chr10:96016800-96032600 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 19 | chr10:96017000-96033600 | Weak transcription | HSMMtube | muscle |
| 20 | chr10:96020200-96030200 | Weak transcription | Duodenum Mucosa | Duodenum |
| 21 | chr10:96020800-96039800 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 22 | chr10:96023600-96038400 | Strong transcription | Rectal Mucosa Donor 31 | rectum |
| 23 | chr10:96024000-96030600 | Strong transcription | Fetal Muscle Leg | muscle |
| 24 | chr10:96024000-96033800 | Strong transcription | Fetal Muscle Trunk | muscle |
| 25 | chr10:96024200-96031200 | Weak transcription | Small Intestine | intestine |
| 26 | chr10:96024200-96033600 | Weak transcription | Fetal Heart | heart |
| 27 | chr10:96024800-96030200 | Weak transcription | Fetal Intestine Small | intestine |
| 28 | chr10:96025400-96030400 | Strong transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 29 | chr10:96025600-96035000 | Strong transcription | Fetal Intestine Large | intestine |
| 30 | chr10:96026000-96034800 | Strong transcription | Rectal Mucosa Donor 29 | rectum |
| 31 | chr10:96026600-96030800 | Strong transcription | Cortex derived primary cultured neurospheres | brain |
| 32 | chr10:96026600-96033800 | Weak transcription | Right Ventricle | heart |
| 33 | chr10:96027400-96033800 | Strong transcription | Fetal Stomach | stomach |
| 34 | chr10:96027600-96030800 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 35 | chr10:96027800-96030200 | Weak transcription | Fetal Lung | lung |
| 36 | chr10:96027800-96030200 | Weak transcription | Stomach Smooth Muscle | stomach |
| 37 | chr10:96028000-96034800 | Strong transcription | Sigmoid Colon | Sigmoid Colon |
| 38 | chr10:96028200-96029400 | Active TSS | Pancreatic Islets | Pancreatic Islet |
| 39 | chr10:96028200-96031200 | Strong transcription | Aorta | Aorta |
| 40 | chr10:96028400-96033800 | Weak transcription | A549 | lung |
| 41 | chr10:96028600-96029400 | Strong transcription | Colonic Mucosa | Colon |
| 42 | chr10:96028800-96029200 | Enhancers | Pancreas | Pancrea |
| 43 | chr10:96028800-96033200 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 44 | chr10:96028800-96041200 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
