The 2.0 version of rSNPBase

Variant report

Variant rs55760458
Chromosome Location chr1:214491536-214491537
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:214456400-214491800 Weak transcription Pancreas Pancrea
2 chr1:214462000-214491800 Weak transcription NHEK skin
3 chr1:214471000-214517400 Weak transcription Fetal Kidney kidney
4 chr1:214476600-214492200 Weak transcription K562 blood
5 chr1:214477200-214491600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr1:214477200-214492200 Weak transcription Aorta Aorta
7 chr1:214477400-214492200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
8 chr1:214477400-214506400 Weak transcription Colon Smooth Muscle Colon
9 chr1:214477400-214506400 Weak transcription Duodenum Smooth Muscle Duodenum
10 chr1:214477400-214511000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
11 chr1:214478800-214491800 Weak transcription Spleen Spleen
12 chr1:214478800-214492200 Weak transcription Esophagus oesophagus
13 chr1:214479000-214503000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
14 chr1:214479200-214491800 Weak transcription Lung lung
15 chr1:214479400-214493000 Enhancers Fetal Heart heart
16 chr1:214482200-214510600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr1:214483600-214492200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
18 chr1:214483600-214501600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
19 chr1:214484400-214499800 Weak transcription Primary hematopoietic stem cells blood
20 chr1:214484400-214510800 Weak transcription Cortex derived primary cultured neurospheres brain
21 chr1:214484800-214491800 Weak transcription Primary T killer naive cells fromperipheralblood blood
22 chr1:214484800-214492200 Weak transcription Primary monocytes fromperipheralblood blood
23 chr1:214484800-214501800 Weak transcription Primary T helper naive cells from peripheral blood blood
24 chr1:214484800-214507800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
25 chr1:214484800-214522000 Weak transcription Primary T killer memory cells from peripheral blood blood
26 chr1:214485000-214492200 Weak transcription Fetal Brain Female brain
27 chr1:214485000-214506400 Weak transcription Rectal Smooth Muscle rectum
28 chr1:214485000-214513200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
29 chr1:214485600-214499600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr1:214485800-214499600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr1:214486000-214492400 Weak transcription Brain Inferior Temporal Lobe brain
32 chr1:214486200-214491600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
33 chr1:214486200-214526000 Weak transcription Psoas Muscle Psoas
34 chr1:214486800-214492400 Weak transcription Right Atrium heart
35 chr1:214487000-214492200 Weak transcription Gastric stomach
36 chr1:214487400-214502600 Weak transcription Colonic Mucosa Colon
37 chr1:214487400-214509400 Strong transcription Primary T cells from cord blood blood
38 chr1:214487600-214497400 Strong transcription Primary T cells fromperipheralblood blood
39 chr1:214487600-214506200 Weak transcription Small Intestine intestine
40 chr1:214487800-214494000 Strong transcription Primary T helper cells PMA-I stimulated --
41 chr1:214487800-214510600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
42 chr1:214488000-214493200 Strong transcription Fetal Intestine Large intestine
43 chr1:214488000-214496400 Strong transcription Dnd41 blood
44 chr1:214488000-214497800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
45 chr1:214488200-214493400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
46 chr1:214488200-214493600 Strong transcription Primary T regulatory cells fromperipheralblood blood
47 chr1:214488200-214499000 Strong transcription Primary T helper cells fromperipheralblood blood
48 chr1:214488200-214500400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
49 chr1:214488200-214517600 Weak transcription Brain Germinal Matrix brain
50 chr1:214488200-214520800 Weak transcription Hela-S3 cervix

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Last update: Aug 31, 2015