Variant report

Variant	rs55832007
Chromosome Location	chr5:135639878-135639879
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs13156621	0.84[AMR][1000 genomes]
rs13156906	0.87[AFR][1000 genomes];0.97[AMR][1000 genomes];0.88[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs13165205	0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs13171723	0.88[AMR][1000 genomes];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs34223526	0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs34756961	0.84[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs34760171	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs34934613	0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs35118298	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs36139242	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs3777147	0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4501337	0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs55633021	0.91[AFR][1000 genomes];0.97[AMR][1000 genomes];0.88[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs55635821	0.91[AFR][1000 genomes];0.97[AMR][1000 genomes];0.88[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs62385831	0.83[AFR][1000 genomes];0.88[AMR][1000 genomes];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs71589310	0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9687860	0.87[AFR][1000 genomes];0.91[AMR][1000 genomes];0.80[EUR][1000 genomes];0.97[ASN][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:135639800-135640200	Active TSS	HUES48 Cell Line	embryonic stem cell
2	chr5:135639800-135640200	Active TSS	HUES6 Cell Line	embryonic stem cell
3	chr5:135639800-135640200	Active TSS	HUES64 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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