Variant report

Variant	rs62385831
Chromosome Location	chr5:135643015-135643016
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 59 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:59)

rs_ID	r²[population]
rs11948153	0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11950418	0.83[EUR][1000 genomes]
rs11954403	0.81[EUR][1000 genomes]
rs11957982	0.82[EUR][1000 genomes]
rs13156621	0.85[AMR][1000 genomes]
rs13156906	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs13158017	0.83[EUR][1000 genomes]
rs13158133	0.83[EUR][1000 genomes]
rs13158359	0.83[EUR][1000 genomes]
rs13158415	0.83[EUR][1000 genomes]
rs13162436	0.83[EUR][1000 genomes]
rs13164177	0.83[EUR][1000 genomes]
rs13165205	0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs13171723	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13174278	0.83[EUR][1000 genomes]
rs13174705	0.83[EUR][1000 genomes]
rs13174755	0.83[EUR][1000 genomes]
rs13177941	0.83[EUR][1000 genomes]
rs13181603	0.83[EUR][1000 genomes]
rs13185795	0.81[EUR][1000 genomes]
rs13186797	0.83[EUR][1000 genomes]
rs1499761	0.82[EUR][1000 genomes]
rs1499771	0.83[EUR][1000 genomes]
rs1499772	0.83[EUR][1000 genomes]
rs17211941	0.83[EUR][1000 genomes]
rs17211962	0.83[EUR][1000 genomes]
rs17791011	0.83[EUR][1000 genomes]
rs17791023	0.83[EUR][1000 genomes]
rs34190055	0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs34223526	0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs34488680	0.82[EUR][1000 genomes]
rs34665015	0.83[EUR][1000 genomes]
rs34756961	0.85[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs34760171	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34808451	0.83[EUR][1000 genomes]
rs34934613	0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs34999969	0.85[EUR][1000 genomes]
rs35003312	0.83[EUR][1000 genomes]
rs35118298	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35175010	0.83[EUR][1000 genomes]
rs35189853	0.81[EUR][1000 genomes]
rs35234652	0.83[EUR][1000 genomes]
rs35555318	0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs35695188	0.83[EUR][1000 genomes]
rs36139242	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3777147	0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4501337	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55633021	0.82[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs55635821	0.82[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs55726215	0.83[EUR][1000 genomes]
rs55832007	0.83[AFR][1000 genomes];0.88[AMR][1000 genomes];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs55996753	0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs62387388	0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs62387410	0.83[EUR][1000 genomes]
rs6871232	0.81[EUR][1000 genomes]
rs71589310	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7703358	0.83[EUR][1000 genomes]
rs7705405	0.80[EUR][1000 genomes]
rs9687860	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.83[ASN][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:135640200-135643200	Weak transcription	HUES64 Cell Line	embryonic stem cell
2	chr5:135643000-135644200	Enhancers	HUES6 Cell Line	embryonic stem cell
3	chr5:135643000-135645600	Enhancers	Fetal Stomach	stomach
4	chr5:135643000-135646000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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