The 2.0 version of rSNPBase

Variant report

Variant rs55838312
Chromosome Location chr4:106164284-106164285
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:104 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:106113600-106173800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
2 chr4:106113600-106195800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
3 chr4:106142000-106190800 Weak transcription Small Intestine intestine
4 chr4:106145600-106167400 Weak transcription NHDF-Ad bronchial
5 chr4:106148000-106192800 Weak transcription Psoas Muscle Psoas
6 chr4:106150200-106191400 Weak transcription HUVEC blood vessel
7 chr4:106153400-106164600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
8 chr4:106154000-106166200 Weak transcription Primary T killer memory cells from peripheral blood blood
9 chr4:106154000-106198800 Weak transcription Hela-S3 cervix
10 chr4:106154200-106164600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
11 chr4:106155000-106166400 Strong transcription Primary hematopoietic stem cells short term culture blood
12 chr4:106155000-106168800 Strong transcription Primary neutrophils fromperipheralblood blood
13 chr4:106155000-106169000 Strong transcription Primary monocytes fromperipheralblood blood
14 chr4:106155000-106176600 Strong transcription Monocytes-CD14+_RO01746 blood
15 chr4:106155800-106167800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
16 chr4:106156400-106168600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
17 chr4:106156600-106180800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
18 chr4:106156800-106190800 Weak transcription Primary T helper naive cells from peripheral blood blood
19 chr4:106156800-106196200 Weak transcription Primary T killer naive cells fromperipheralblood blood
20 chr4:106157000-106164600 Weak transcription Pancreatic Islets Pancreatic Islet
21 chr4:106157000-106186000 Weak transcription NH-A brain
22 chr4:106157000-106190400 Weak transcription Primary T helper naive cells fromperipheralblood blood
23 chr4:106157200-106164800 Weak transcription Primary T cells fromperipheralblood blood
24 chr4:106157400-106166600 Weak transcription Spleen Spleen
25 chr4:106157400-106193600 Weak transcription Colonic Mucosa Colon
26 chr4:106157600-106164600 Weak transcription Stomach Smooth Muscle stomach
27 chr4:106157800-106190600 Weak transcription NHLF lung
28 chr4:106158000-106164800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr4:106158000-106167200 Weak transcription Osteobl bone
30 chr4:106158000-106180800 Weak transcription Skeletal Muscle Female skeletal muscle
31 chr4:106158200-106164400 Weak transcription Primary T helper cells PMA-I stimulated --
32 chr4:106158200-106164600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
33 chr4:106158200-106164600 Weak transcription Primary T regulatory cells fromperipheralblood blood
34 chr4:106158200-106164600 Weak transcription Fetal Intestine Small intestine
35 chr4:106158200-106164600 Weak transcription Sigmoid Colon Sigmoid Colon
36 chr4:106158200-106167200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
37 chr4:106158200-106171600 Weak transcription Fetal Stomach stomach
38 chr4:106158200-106171800 Weak transcription Esophagus oesophagus
39 chr4:106158200-106173000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
40 chr4:106158200-106186600 Weak transcription Stomach Mucosa stomach
41 chr4:106158200-106190600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr4:106158200-106190600 Weak transcription NHEK skin
43 chr4:106158200-106190800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
44 chr4:106158200-106190800 Weak transcription Pancreas Pancrea
45 chr4:106158200-106190800 Weak transcription Placenta Amnion Placenta Amnion
46 chr4:106158200-106190800 Weak transcription Skeletal Muscle Male skeletal muscle
47 chr4:106158400-106164600 Weak transcription Aorta Aorta
48 chr4:106158400-106164600 Weak transcription Duodenum Mucosa Duodenum
49 chr4:106158400-106167200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
50 chr4:106158400-106167200 Weak transcription Muscle Satellite Cultured Cells --

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Last update: Aug 31, 2015