The 2.0 version of rSNPBase

Variant report

Variant rs55840418
Chromosome Location chr18:44698373-44698374
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:91 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:44677600-44700200 Weak transcription Aorta Aorta
2 chr18:44677800-44699000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
3 chr18:44677800-44700400 Weak transcription Spleen Spleen
4 chr18:44677800-44701000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr18:44677800-44701000 Weak transcription Brain Inferior Temporal Lobe brain
6 chr18:44677800-44701000 Weak transcription A549 lung
7 chr18:44677800-44701800 Weak transcription Esophagus oesophagus
8 chr18:44678000-44699600 Weak transcription Colon Smooth Muscle Colon
9 chr18:44678000-44700400 Weak transcription Small Intestine intestine
10 chr18:44678000-44700800 Weak transcription Cortex derived primary cultured neurospheres brain
11 chr18:44678000-44701000 Weak transcription Fetal Stomach stomach
12 chr18:44678200-44700200 Weak transcription Brain Angular Gyrus brain
13 chr18:44678200-44700800 Weak transcription Primary T regulatory cells fromperipheralblood blood
14 chr18:44678200-44701000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
15 chr18:44678200-44701200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
16 chr18:44678200-44701200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
17 chr18:44678400-44700000 Weak transcription Psoas Muscle Psoas
18 chr18:44678400-44700800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
19 chr18:44678400-44700800 Weak transcription Lung lung
20 chr18:44678600-44699000 Weak transcription Dnd41 blood
21 chr18:44681200-44699000 Weak transcription Breast Myoepithelial Primary Cells Breast
22 chr18:44681200-44699600 Weak transcription Fetal Muscle Leg muscle
23 chr18:44681200-44699600 Weak transcription Sigmoid Colon Sigmoid Colon
24 chr18:44681200-44699800 Weak transcription Left Ventricle heart
25 chr18:44681400-44699600 Weak transcription Primary T cells from cord blood blood
26 chr18:44681600-44700200 Weak transcription Fetal Kidney kidney
27 chr18:44681800-44699400 Weak transcription Fetal Muscle Trunk muscle
28 chr18:44681800-44699800 Weak transcription Duodenum Smooth Muscle Duodenum
29 chr18:44681800-44700200 Weak transcription HSMM muscle
30 chr18:44681800-44700800 Weak transcription Primary T cells fromperipheralblood blood
31 chr18:44681800-44700800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
32 chr18:44681800-44700800 Weak transcription Placenta Placenta
33 chr18:44681800-44701000 Weak transcription Primary hematopoietic stem cells blood
34 chr18:44681800-44701000 Weak transcription Fetal Thymus thymus
35 chr18:44681800-44701200 Weak transcription Primary monocytes fromperipheralblood blood
36 chr18:44682400-44700200 Weak transcription Liver Liver
37 chr18:44682400-44701000 Weak transcription Rectal Mucosa Donor 29 rectum
38 chr18:44682600-44698800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
39 chr18:44683000-44699600 Weak transcription Adipose Nuclei Adipose
40 chr18:44683000-44700000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
41 chr18:44683000-44700800 Weak transcription Fetal Intestine Large intestine
42 chr18:44683000-44700800 Weak transcription NH-A brain
43 chr18:44683000-44701000 Weak transcription Monocytes-CD14+_RO01746 blood
44 chr18:44683000-44701200 Weak transcription iPS-18 Cell Line embryonic stem cell
45 chr18:44685200-44700800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
46 chr18:44685800-44700400 Weak transcription Hela-S3 cervix
47 chr18:44686800-44701200 Weak transcription H9 Cell Line embryonic stem cell
48 chr18:44687400-44698800 Weak transcription HUES48 Cell Line embryonic stem cell
49 chr18:44687400-44701000 Weak transcription HUES64 Cell Line embryonic stem cell
50 chr18:44687600-44701000 Weak transcription HUES6 Cell Line embryonic stem cell

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Last update: Aug 31, 2015