Variant report
| Variant | rs55851003 |
|---|---|
| Chromosome Location | chr15:59515733-59515734 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr15:59467800-59523200 | Weak transcription | Fetal Brain Female | brain |
| 2 | chr15:59468200-59528600 | Weak transcription | Stomach Mucosa | stomach |
| 3 | chr15:59468600-59521400 | Strong transcription | Rectal Mucosa Donor 29 | rectum |
| 4 | chr15:59475800-59517800 | Strong transcription | HUES48 Cell Line | embryonic stem cell |
| 5 | chr15:59485600-59521200 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 6 | chr15:59487800-59524400 | Weak transcription | Small Intestine | intestine |
| 7 | chr15:59492000-59521600 | Strong transcription | Rectal Mucosa Donor 31 | rectum |
| 8 | chr15:59493200-59523200 | Strong transcription | Hela-S3 | cervix |
| 9 | chr15:59496800-59522000 | Strong transcription | NHEK | skin |
| 10 | chr15:59497000-59524800 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 11 | chr15:59497200-59517600 | Strong transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 12 | chr15:59498000-59516000 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 13 | chr15:59498800-59522000 | Strong transcription | GM12878-XiMat | blood |
| 14 | chr15:59500000-59517600 | Weak transcription | Fetal Lung | lung |
| 15 | chr15:59500000-59524400 | Weak transcription | Right Ventricle | heart |
| 16 | chr15:59500600-59524600 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 17 | chr15:59501200-59521400 | Weak transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 18 | chr15:59501200-59523400 | Weak transcription | Ovary | ovary |
| 19 | chr15:59501200-59525600 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 20 | chr15:59502800-59525800 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 21 | chr15:59503800-59518000 | Strong transcription | Sigmoid Colon | Sigmoid Colon |
| 22 | chr15:59504000-59520200 | Strong transcription | Liver | Liver |
| 23 | chr15:59504800-59517800 | Strong transcription | Primary monocytes fromperipheralblood | blood |
| 24 | chr15:59505200-59516000 | Weak transcription | Brain Anterior Caudate | brain |
| 25 | chr15:59505800-59518000 | Strong transcription | HUES64 Cell Line | embryonic stem cell |
| 26 | chr15:59506800-59517400 | Strong transcription | H1 Cell Line | embryonic stem cell |
| 27 | chr15:59509600-59516200 | Weak transcription | Psoas Muscle | Psoas |
| 28 | chr15:59510200-59516200 | Weak transcription | Esophagus | oesophagus |
| 29 | chr15:59510200-59516600 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 30 | chr15:59511400-59549200 | Weak transcription | Colonic Mucosa | Colon |
| 31 | chr15:59511600-59517400 | Strong transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 32 | chr15:59511800-59517200 | Strong transcription | Primary B cells from cord blood | blood |
| 33 | chr15:59512200-59521600 | Strong transcription | Fetal Intestine Small | intestine |
| 34 | chr15:59512400-59518400 | Strong transcription | Duodenum Mucosa | Duodenum |
| 35 | chr15:59512600-59520000 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 36 | chr15:59513400-59515800 | Genic enhancers | NH-A | brain |
| 37 | chr15:59513400-59516400 | Genic enhancers | HUVEC | blood vessel |
| 38 | chr15:59513400-59516600 | Genic enhancers | NHDF-Ad | bronchial |
| 39 | chr15:59513400-59517600 | Strong transcription | HUES6 Cell Line | embryonic stem cell |
| 40 | chr15:59513400-59517800 | Genic enhancers | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 41 | chr15:59513400-59520200 | Strong transcription | Primary B cells from peripheral blood | blood |
| 42 | chr15:59513400-59521600 | Strong transcription | Fetal Intestine Large | intestine |
| 43 | chr15:59513600-59516000 | Enhancers | Brain Substantia Nigra | brain |
| 44 | chr15:59513600-59516400 | Genic enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 45 | chr15:59513600-59516400 | Enhancers | Fetal Kidney | kidney |
| 46 | chr15:59513600-59516800 | Strong transcription | Fetal Muscle Trunk | muscle |
| 47 | chr15:59513600-59517000 | Enhancers | Brain Angular Gyrus | brain |
| 48 | chr15:59513600-59517200 | Genic enhancers | Muscle Satellite Cultured Cells | -- |
| 49 | chr15:59513600-59517200 | Strong transcription | Monocytes-CD14+_RO01746 | blood |
| 50 | chr15:59513600-59517600 | Strong transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
