The 2.0 version of rSNPBase

Variant report

Variant rs55868933
Chromosome Location chr8:49732306-49732307
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:49727600-49732600 Weak transcription Primary monocytes fromperipheralblood blood
2 chr8:49728000-49732400 Weak transcription Monocytes-CD14+_RO01746 blood
3 chr8:49728200-49734000 Enhancers Fetal Muscle Leg muscle
4 chr8:49728200-49734400 Enhancers Fetal Muscle Trunk muscle
5 chr8:49729600-49732400 Weak transcription Psoas Muscle Psoas
6 chr8:49729600-49733400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
7 chr8:49730000-49732400 Enhancers Fetal Brain Male brain
8 chr8:49730200-49732400 Enhancers Fetal Brain Female brain
9 chr8:49730200-49733000 Enhancers Skeletal Muscle Male skeletal muscle
10 chr8:49730400-49732400 Enhancers Brain Germinal Matrix brain
11 chr8:49730400-49734400 Enhancers Pancreas Pancrea
12 chr8:49730400-49734600 Enhancers Breast Myoepithelial Primary Cells Breast
13 chr8:49730600-49732400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
14 chr8:49730600-49732400 Enhancers HUES6 Cell Line embryonic stem cell
15 chr8:49730600-49732600 Enhancers Fetal Stomach stomach
16 chr8:49730600-49732800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr8:49730600-49733200 Enhancers HMEC breast
18 chr8:49730600-49733600 Enhancers Hela-S3 cervix
19 chr8:49730600-49734000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr8:49730800-49732400 Enhancers ES-WA7 Cell Line embryonic stem cell
21 chr8:49730800-49732800 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
22 chr8:49730800-49733000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr8:49730800-49733000 Enhancers Esophagus oesophagus
24 chr8:49731000-49732800 Enhancers Gastric stomach
25 chr8:49731000-49733000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
26 chr8:49731000-49733200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr8:49731000-49734600 Enhancers Placenta Amnion Placenta Amnion
28 chr8:49731000-49740200 Weak transcription HSMMtube muscle
29 chr8:49731200-49732400 Weak transcription Adipose Nuclei Adipose
30 chr8:49731200-49732400 Weak transcription Right Atrium heart
31 chr8:49731200-49732400 Weak transcription Right Ventricle heart
32 chr8:49731200-49732400 Weak transcription NHEK skin
33 chr8:49731200-49732600 Weak transcription Lung lung
34 chr8:49731200-49732800 Weak transcription Fetal Lung lung
35 chr8:49731200-49733400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr8:49731200-49736000 Weak transcription NHLF lung
37 chr8:49731200-49736400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr8:49731200-49736400 Weak transcription NHDF-Ad bronchial
39 chr8:49731200-49736600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr8:49731200-49736600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr8:49731200-49736600 Weak transcription Osteobl bone
42 chr8:49731200-49738000 Weak transcription Spleen Spleen
43 chr8:49731400-49732600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
44 chr8:49731400-49733200 Weak transcription Small Intestine intestine
45 chr8:49731600-49732400 Flanking Active TSS Liver Liver
46 chr8:49731600-49733200 Weak transcription Stomach Mucosa stomach
47 chr8:49731800-49732400 Enhancers Fetal Thymus thymus
48 chr8:49731800-49732600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr8:49731800-49733200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
50 chr8:49731800-49736600 Weak transcription Muscle Satellite Cultured Cells --

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Last update: Aug 31, 2015