Variant report

Variant	rs11783791
Chromosome Location	chr8:49724699-49724700
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs10097910	0.83[CEU][hapmap]
rs10103815	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10108018	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1023769	1.00[CEU][hapmap];0.94[JPT][hapmap]
rs1126259	0.85[MEX][hapmap]
rs11779318	0.84[AMR][1000 genomes];0.82[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs13276316	0.80[MEX][hapmap]
rs2735455	1.00[CEU][hapmap]
rs28620290	0.97[ASN][1000 genomes]
rs4873087	0.90[ASN][1000 genomes]
rs4873290	1.00[ASW][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.93[LWK][hapmap];0.90[MEX][hapmap];0.87[MKK][hapmap];0.94[TSI][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.87[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55868933	0.88[EUR][1000 genomes]
rs6472078	0.97[ASN][1000 genomes]
rs6989076	0.97[ASN][1000 genomes]
rs7007780	0.94[ASW][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.93[LWK][hapmap];0.90[MEX][hapmap];0.87[MKK][hapmap];0.94[TSI][hapmap];0.93[YRI][hapmap];0.95[AFR][1000 genomes];0.87[AMR][1000 genomes];0.82[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7831003	0.98[ASN][1000 genomes]
rs966703	0.85[MEX][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv526887	chr8:49724699-49729020	Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:49723200-49730800	Weak transcription	Spleen	Spleen
2	chr8:49723800-49727000	Weak transcription	Monocytes-CD14+_RO01746	blood
3	chr8:49723800-49727200	Weak transcription	Primary monocytes fromperipheralblood	blood
4	chr8:49724000-49728600	Weak transcription	Fetal Lung	lung
5	chr8:49724400-49725400	Enhancers	Pancreas	Pancrea
6	chr8:49724400-49730400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
7	chr8:49724600-49727000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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