Variant report

Variant rs55912911
Chromosome Location chr2:37502951-37502952
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:37460200-37528600 Weak transcription Stomach Mucosa stomach
2 chr2:37461200-37518800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr2:37463400-37509600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
4 chr2:37467600-37530200 Weak transcription Pancreas Pancrea
5 chr2:37470400-37521600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr2:37470800-37521400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
7 chr2:37479400-37520600 Weak transcription Primary T killer memory cells from peripheral blood blood
8 chr2:37480600-37505000 Weak transcription ES-WA7 Cell Line embryonic stem cell
9 chr2:37482800-37528600 Weak transcription Brain Cingulate Gyrus brain
10 chr2:37484200-37539000 Weak transcription Primary T helper naive cells from peripheral blood blood
11 chr2:37484400-37511600 Weak transcription Fetal Brain Male brain
12 chr2:37484600-37550400 Weak transcription Right Ventricle heart
13 chr2:37487200-37528600 Weak transcription Brain Substantia Nigra brain
14 chr2:37487600-37521200 Weak transcription Brain Angular Gyrus brain
15 chr2:37490400-37503400 Strong transcription Liver Liver
16 chr2:37490400-37507000 Strong transcription Cortex derived primary cultured neurospheres brain
17 chr2:37490400-37510800 Strong transcription Breast Myoepithelial Primary Cells Breast
18 chr2:37490600-37521000 Strong transcription Dnd41 blood
19 chr2:37491000-37503200 Strong transcription Fetal Muscle Leg muscle
20 chr2:37491000-37512400 Weak transcription Pancreatic Islets Pancreatic Islet
21 chr2:37491200-37503600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
22 chr2:37491200-37510200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr2:37491200-37510200 Strong transcription Primary T helper cells fromperipheralblood blood
24 chr2:37491600-37503000 Strong transcription Fetal Thymus thymus
25 chr2:37491800-37503400 Strong transcription Fetal Intestine Large intestine
26 chr2:37491800-37509400 Strong transcription Osteobl bone
27 chr2:37492000-37503600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr2:37492000-37507000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
29 chr2:37492000-37509600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr2:37492000-37510800 Strong transcription Primary B cells from peripheral blood blood
31 chr2:37492000-37511200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
32 chr2:37492400-37510000 Weak transcription Fetal Heart heart
33 chr2:37492800-37511200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
34 chr2:37493200-37508000 Weak transcription NHLF lung
35 chr2:37494000-37510200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
36 chr2:37494800-37503200 Strong transcription Rectal Mucosa Donor 31 rectum
37 chr2:37495200-37503200 Strong transcription Primary hematopoietic stem cells blood
38 chr2:37495200-37504400 Strong transcription NH-A brain
39 chr2:37495400-37503800 Strong transcription Rectal Mucosa Donor 29 rectum
40 chr2:37495400-37509800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
41 chr2:37495400-37510600 Strong transcription Primary B cells from cord blood blood
42 chr2:37495600-37503400 Strong transcription Primary T cells from cord blood blood
43 chr2:37497600-37503200 Strong transcription Stomach Smooth Muscle stomach
44 chr2:37497800-37504800 Strong transcription Primary T helper cells PMA-I stimulated --
45 chr2:37498000-37505200 Strong transcription Duodenum Mucosa Duodenum
46 chr2:37498600-37503000 Strong transcription Primary T helper naive cells fromperipheralblood blood
47 chr2:37498800-37505200 Enhancers Primary neutrophils fromperipheralblood blood
48 chr2:37499000-37510400 Strong transcription iPS-20b Cell Line embryonic stem cell
49 chr2:37499200-37520800 Strong transcription HUES64 Cell Line embryonic stem cell
50 chr2:37499200-37521400 Strong transcription HUES6 Cell Line embryonic stem cell

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