Variant report

Variant	rs55934143
Chromosome Location	chr10:89778392-89778393
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs17106669	0.83[EUR][1000 genomes]
rs34370136	0.83[EUR][1000 genomes]
rs34821441	0.83[EUR][1000 genomes]
rs35286623	0.87[EUR][1000 genomes]
rs35596448	0.89[EUR][1000 genomes]
rs55780924	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56014839	0.83[EUR][1000 genomes]
rs56378211	0.83[EUR][1000 genomes]
rs72814166	0.83[EUR][1000 genomes]
rs72814183	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72814184	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72814186	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72814188	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72814190	0.96[EUR][1000 genomes]
rs72814201	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72814202	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72816104	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72816109	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72816113	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:89758400-89785800	Weak transcription	Aorta	Aorta
2	chr10:89774200-89785600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
3	chr10:89778000-89779000	Enhancers	Adipose Nuclei	Adipose
4	chr10:89778200-89779000	Weak transcription	NHDF-Ad	bronchial
5	chr10:89778200-89781200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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