The 2.0 version of rSNPBase

Variant report

Variant rs55943468
Chromosome Location chr6:12081946-12081947
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:95 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:12061600-12084000 Weak transcription Duodenum Smooth Muscle Duodenum
2 chr6:12061600-12085400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
3 chr6:12061600-12105200 Weak transcription Duodenum Mucosa Duodenum
4 chr6:12061600-12109600 Weak transcription HUES6 Cell Line embryonic stem cell
5 chr6:12061800-12082000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
6 chr6:12061800-12083600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
7 chr6:12065200-12095000 Weak transcription NHDF-Ad bronchial
8 chr6:12066400-12083600 Weak transcription H1 Cell Line embryonic stem cell
9 chr6:12066400-12083600 Weak transcription Brain Substantia Nigra brain
10 chr6:12066400-12083600 Weak transcription Skeletal Muscle Female skeletal muscle
11 chr6:12066400-12085000 Weak transcription Gastric stomach
12 chr6:12066400-12085200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
13 chr6:12066400-12093000 Weak transcription Fetal Thymus thymus
14 chr6:12066400-12103600 Weak transcription Pancreas Pancrea
15 chr6:12066400-12107600 Weak transcription Fetal Muscle Leg muscle
16 chr6:12066600-12084000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
17 chr6:12066800-12083600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr6:12066800-12083600 Weak transcription HSMMtube muscle
19 chr6:12066800-12085400 Weak transcription Right Ventricle heart
20 chr6:12066800-12109600 Weak transcription Skeletal Muscle Male skeletal muscle
21 chr6:12067000-12083600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr6:12068600-12090600 Weak transcription Right Atrium heart
23 chr6:12069600-12082200 Weak transcription Colon Smooth Muscle Colon
24 chr6:12069600-12095200 Weak transcription Rectal Mucosa Donor 31 rectum
25 chr6:12070000-12090600 Weak transcription Rectal Mucosa Donor 29 rectum
26 chr6:12070800-12120400 Weak transcription Placenta Amnion Placenta Amnion
27 chr6:12071600-12091800 Weak transcription Esophagus oesophagus
28 chr6:12071600-12093000 Weak transcription Primary T cells fromperipheralblood blood
29 chr6:12071800-12083600 Weak transcription Primary T killer memory cells from peripheral blood blood
30 chr6:12071800-12083600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
31 chr6:12071800-12094400 Weak transcription Fetal Adrenal Gland Adrenal Gland
32 chr6:12071800-12095400 Weak transcription Primary T killer naive cells fromperipheralblood blood
33 chr6:12071800-12098000 Weak transcription NH-A brain
34 chr6:12071800-12120400 Weak transcription HepG2 liver
35 chr6:12072000-12083600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
36 chr6:12072000-12093000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr6:12072200-12092400 Weak transcription Thymus Thymus
38 chr6:12072800-12089600 Weak transcription HUVEC blood vessel
39 chr6:12075400-12085400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
40 chr6:12075600-12082400 Weak transcription Primary T cells from cord blood blood
41 chr6:12075600-12082800 Weak transcription Fetal Lung lung
42 chr6:12075600-12085200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr6:12075600-12085400 Weak transcription Left Ventricle heart
44 chr6:12075600-12088600 Weak transcription Rectal Smooth Muscle rectum
45 chr6:12075800-12093400 Weak transcription Colonic Mucosa Colon
46 chr6:12077800-12083800 Weak transcription iPS-18 Cell Line embryonic stem cell
47 chr6:12077800-12088800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr6:12077800-12098000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr6:12077800-12113400 Weak transcription HMEC breast
50 chr6:12078000-12109800 Weak transcription Fetal Muscle Trunk muscle

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015