The 2.0 version of rSNPBase

Variant report

Variant rs55962052
Chromosome Location chr4:121822190-121822191
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:121796400-121824400 Weak transcription H1 Cell Line embryonic stem cell
2 chr4:121797000-121823800 Weak transcription Osteobl bone
3 chr4:121798200-121842400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr4:121802200-121826600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
5 chr4:121803400-121822600 Weak transcription Aorta Aorta
6 chr4:121803400-121827400 Weak transcription NHDF-Ad bronchial
7 chr4:121804200-121822400 Weak transcription iPS-20b Cell Line embryonic stem cell
8 chr4:121804800-121830200 Weak transcription Fetal Heart heart
9 chr4:121811200-121824600 Weak transcription iPS-18 Cell Line embryonic stem cell
10 chr4:121812000-121831000 Weak transcription Muscle Satellite Cultured Cells --
11 chr4:121812000-121839400 Weak transcription Duodenum Smooth Muscle Duodenum
12 chr4:121812400-121836600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
13 chr4:121812800-121823000 Weak transcription Stomach Smooth Muscle stomach
14 chr4:121812800-121824400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr4:121812800-121839800 Weak transcription Psoas Muscle Psoas
16 chr4:121813000-121824600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
17 chr4:121813000-121837400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
18 chr4:121813200-121824000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr4:121813400-121839400 Weak transcription Sigmoid Colon Sigmoid Colon
20 chr4:121813400-121841600 Weak transcription Fetal Adrenal Gland Adrenal Gland
21 chr4:121813600-121824000 Weak transcription HUES64 Cell Line embryonic stem cell
22 chr4:121813600-121839800 Weak transcription Cortex derived primary cultured neurospheres brain
23 chr4:121813800-121842400 Weak transcription NHEK skin
24 chr4:121814200-121839800 Weak transcription Pancreas Pancrea
25 chr4:121814400-121823200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr4:121814400-121824000 Weak transcription HUES48 Cell Line embryonic stem cell
27 chr4:121814600-121822600 Weak transcription Fetal Intestine Large intestine
28 chr4:121814600-121822800 Weak transcription Fetal Intestine Small intestine
29 chr4:121814600-121823600 Weak transcription HUES6 Cell Line embryonic stem cell
30 chr4:121814600-121823800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
31 chr4:121814600-121823800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr4:121814600-121824000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
33 chr4:121814600-121824200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr4:121814600-121824600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
35 chr4:121814600-121824600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
36 chr4:121814600-121828600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr4:121814600-121829000 Weak transcription Ovary ovary
38 chr4:121814600-121830400 Weak transcription Lung lung
39 chr4:121814600-121836600 Weak transcription H9 Cell Line embryonic stem cell
40 chr4:121814600-121840000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
41 chr4:121814600-121842600 Weak transcription Right Ventricle heart
42 chr4:121814800-121824000 Weak transcription Fetal Lung lung
43 chr4:121814800-121828200 Weak transcription Colon Smooth Muscle Colon
44 chr4:121815200-121839800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr4:121815600-121822400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr4:121818000-121826600 Weak transcription Left Ventricle heart
47 chr4:121818000-121842400 Weak transcription NH-A brain
48 chr4:121820200-121823600 Weak transcription Breast Myoepithelial Primary Cells Breast
49 chr4:121820400-121826400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
50 chr4:121820800-121824000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived

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Last update: Aug 31, 2015