Variant report

Variant rs55964438
Chromosome Location chr20:23042519-23042520
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:79 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:23038400-23046600 Enhancers Fetal Lung lung
2 chr20:23039600-23043400 Enhancers Dnd41 blood
3 chr20:23039800-23046000 Enhancers Fetal Muscle Leg muscle
4 chr20:23040200-23043600 Enhancers Placenta Placenta
5 chr20:23040200-23043800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
6 chr20:23040200-23043800 Enhancers Skeletal Muscle Male skeletal muscle
7 chr20:23040200-23046800 Enhancers Fetal Stomach stomach
8 chr20:23040400-23043200 Enhancers Brain Substantia Nigra brain
9 chr20:23040400-23043400 Enhancers Adipose Nuclei Adipose
10 chr20:23040400-23043600 Enhancers Left Ventricle heart
11 chr20:23040400-23043600 Enhancers Monocytes-CD14+_RO01746 blood
12 chr20:23040400-23044400 Enhancers Fetal Adrenal Gland Adrenal Gland
13 chr20:23040400-23044600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
14 chr20:23040400-23044800 Enhancers Primary monocytes fromperipheralblood blood
15 chr20:23040400-23044800 Enhancers HUVEC blood vessel
16 chr20:23040600-23042600 Flanking Active TSS HSMMtube muscle
17 chr20:23040600-23043400 Enhancers Right Atrium heart
18 chr20:23040600-23043600 Enhancers Ovary ovary
19 chr20:23040600-23043600 Enhancers Placenta Amnion Placenta Amnion
20 chr20:23040600-23044000 Enhancers NHDF-Ad bronchial
21 chr20:23040800-23043000 Weak transcription Esophagus oesophagus
22 chr20:23040800-23044600 Enhancers Fetal Kidney kidney
23 chr20:23041000-23043200 Enhancers Colon Smooth Muscle Colon
24 chr20:23041200-23043600 Enhancers NHLF lung
25 chr20:23041400-23042600 Enhancers A549 lung
26 chr20:23041400-23043200 Enhancers Brain Inferior Temporal Lobe brain
27 chr20:23041400-23043200 Enhancers Spleen Spleen
28 chr20:23041600-23042600 Weak transcription Primary hematopoietic stem cells short term culture blood
29 chr20:23041600-23042600 Enhancers Brain Angular Gyrus brain
30 chr20:23041600-23043000 Enhancers Brain Dorsolateral Prefrontal Cortex brain
31 chr20:23041600-23043200 Enhancers Brain Hippocampus Middle brain
32 chr20:23041600-23043400 Enhancers Psoas Muscle Psoas
33 chr20:23041600-23043600 Enhancers K562 blood
34 chr20:23041600-23044000 Enhancers iPS-20b Cell Line embryonic stem cell
35 chr20:23041800-23042800 Flanking Active TSS HSMM muscle
36 chr20:23041800-23043200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
37 chr20:23041800-23043400 Enhancers Brain Anterior Caudate brain
38 chr20:23041800-23043400 Enhancers Rectal Smooth Muscle rectum
39 chr20:23041800-23043400 Enhancers Osteobl bone
40 chr20:23041800-23043600 Enhancers Muscle Satellite Cultured Cells --
41 chr20:23041800-23043600 Enhancers NH-A brain
42 chr20:23041800-23044200 Enhancers Fetal Muscle Trunk muscle
43 chr20:23042000-23042800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
44 chr20:23042000-23043000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
45 chr20:23042000-23043000 Weak transcription Aorta Aorta
46 chr20:23042000-23043200 Enhancers HUES48 Cell Line embryonic stem cell
47 chr20:23042000-23043200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
48 chr20:23042000-23043400 Enhancers Right Ventricle heart
49 chr20:23042000-23043600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
50 chr20:23042000-23043800 Enhancers H1 Cell Line embryonic stem cell

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