Variant report
| Variant | rs55994846 |
|---|---|
| Chromosome Location | chr3:42699716-42699717 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:42696800-42701200 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 2 | chr3:42697000-42699800 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 3 | chr3:42697000-42699800 | Weak transcription | Aorta | Aorta |
| 4 | chr3:42697000-42700000 | Genic enhancers | iPS DF 19.11 Cell Line | embryonic stem cell |
| 5 | chr3:42697000-42700600 | Weak transcription | Primary neutrophils fromperipheralblood | blood |
| 6 | chr3:42697000-42702400 | Genic enhancers | Fetal Muscle Trunk | muscle |
| 7 | chr3:42697200-42699800 | Enhancers | Skeletal Muscle Female | skeletal muscle |
| 8 | chr3:42697200-42701400 | Genic enhancers | Fetal Muscle Leg | muscle |
| 9 | chr3:42697200-42703000 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 10 | chr3:42697200-42704600 | Weak transcription | Primary B cells from cord blood | blood |
| 11 | chr3:42697400-42699800 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 12 | chr3:42697400-42699800 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 13 | chr3:42697400-42699800 | Weak transcription | Ovary | ovary |
| 14 | chr3:42697400-42700000 | Enhancers | HepG2 | liver |
| 15 | chr3:42697400-42700200 | Enhancers | Brain Substantia Nigra | brain |
| 16 | chr3:42697400-42700400 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 17 | chr3:42697400-42700800 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 18 | chr3:42697400-42701200 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 19 | chr3:42697400-42702000 | Weak transcription | Fetal Kidney | kidney |
| 20 | chr3:42697400-42703000 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 21 | chr3:42697400-42706800 | Weak transcription | HMEC | breast |
| 22 | chr3:42697400-42708800 | Weak transcription | Duodenum Mucosa | Duodenum |
| 23 | chr3:42697400-42708800 | Weak transcription | Fetal Lung | lung |
| 24 | chr3:42697600-42699800 | Enhancers | Brain Angular Gyrus | brain |
| 25 | chr3:42697600-42699800 | Enhancers | Brain Anterior Caudate | brain |
| 26 | chr3:42697600-42699800 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 27 | chr3:42697600-42700000 | Enhancers | Brain Inferior Temporal Lobe | brain |
| 28 | chr3:42697600-42700000 | Weak transcription | Right Atrium | heart |
| 29 | chr3:42697600-42703400 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 30 | chr3:42697600-42704600 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 31 | chr3:42697600-42704800 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 32 | chr3:42697600-42707000 | Weak transcription | A549 | lung |
| 33 | chr3:42697600-42708000 | Weak transcription | Colonic Mucosa | Colon |
| 34 | chr3:42697600-42709800 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 35 | chr3:42697800-42699800 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 36 | chr3:42697800-42699800 | Weak transcription | Adipose Nuclei | Adipose |
| 37 | chr3:42697800-42699800 | Weak transcription | Brain Germinal Matrix | brain |
| 38 | chr3:42697800-42700000 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 39 | chr3:42697800-42701000 | Weak transcription | Rectal Smooth Muscle | rectum |
| 40 | chr3:42697800-42702200 | Weak transcription | HSMMtube | muscle |
| 41 | chr3:42697800-42702600 | Genic enhancers | Brain Hippocampus Middle | brain |
| 42 | chr3:42697800-42707200 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 43 | chr3:42697800-42707600 | Strong transcription | Fetal Intestine Small | intestine |
| 44 | chr3:42697800-42707800 | Weak transcription | Psoas Muscle | Psoas |
| 45 | chr3:42697800-42709400 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 46 | chr3:42698000-42700000 | Weak transcription | Pancreas | Pancrea |
| 47 | chr3:42698000-42700200 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 48 | chr3:42698000-42700200 | Weak transcription | Primary monocytes fromperipheralblood | blood |
| 49 | chr3:42698000-42701200 | Weak transcription | NH-A | brain |
| 50 | chr3:42698000-42706400 | Strong transcription | Fetal Stomach | stomach |
