Variant report

Variant rs58825152
Chromosome Location chr3:42586686-42586687
allele A/C/T
Outlinks Ensembl   UCSC
Chromatin state (count:102 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:42557800-42590400 Weak transcription Aorta Aorta
2 chr3:42562400-42586800 Weak transcription Small Intestine intestine
3 chr3:42574800-42590200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr3:42575200-42589200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
5 chr3:42575200-42594400 Weak transcription Placenta Amnion Placenta Amnion
6 chr3:42575600-42590000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
7 chr3:42577400-42590800 Weak transcription H9 Cell Line embryonic stem cell
8 chr3:42577400-42592800 Weak transcription HUES64 Cell Line embryonic stem cell
9 chr3:42577600-42592000 Weak transcription HUES48 Cell Line embryonic stem cell
10 chr3:42577800-42597600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
11 chr3:42578400-42586800 Weak transcription ES-I3 Cell Line embryonic stem cell
12 chr3:42578400-42593200 Weak transcription Primary T helper naive cells from peripheral blood blood
13 chr3:42578400-42593400 Weak transcription iPS-18 Cell Line embryonic stem cell
14 chr3:42580000-42589800 Weak transcription Primary T cells from cord blood blood
15 chr3:42580800-42588600 Enhancers Lung lung
16 chr3:42581000-42587000 Enhancers Gastric stomach
17 chr3:42581400-42589200 Weak transcription iPS-15b Cell Line embryonic stem cell
18 chr3:42581800-42589000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
19 chr3:42581800-42589800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
20 chr3:42581800-42591200 Weak transcription Primary T regulatory cells fromperipheralblood blood
21 chr3:42581800-42594400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
22 chr3:42582000-42593600 Weak transcription Primary T helper cells fromperipheralblood blood
23 chr3:42582000-42593600 Weak transcription Primary T killer naive cells fromperipheralblood blood
24 chr3:42582000-42594400 Weak transcription Primary T helper naive cells fromperipheralblood blood
25 chr3:42582200-42587400 Weak transcription Breast Myoepithelial Primary Cells Breast
26 chr3:42582200-42589800 Weak transcription Primary T cells fromperipheralblood blood
27 chr3:42582200-42594400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
28 chr3:42582800-42591600 Weak transcription Primary T helper cells PMA-I stimulated --
29 chr3:42582800-42592000 Weak transcription Ovary ovary
30 chr3:42583000-42590600 Weak transcription Fetal Heart heart
31 chr3:42583400-42589600 Weak transcription Fetal Brain Female brain
32 chr3:42584000-42587400 Enhancers Pancreas Pancrea
33 chr3:42584000-42587400 Enhancers Stomach Mucosa stomach
34 chr3:42584400-42589800 Weak transcription Primary hematopoietic stem cells short term culture blood
35 chr3:42584600-42587800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr3:42584600-42590000 Weak transcription Primary monocytes fromperipheralblood blood
37 chr3:42584800-42589600 Weak transcription Monocytes-CD14+_RO01746 blood
38 chr3:42585000-42587200 Enhancers Brain Dorsolateral Prefrontal Cortex brain
39 chr3:42585000-42587400 Enhancers Fetal Lung lung
40 chr3:42585000-42590200 Enhancers Liver Liver
41 chr3:42585000-42590800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr3:42585200-42587000 Enhancers Brain Cingulate Gyrus brain
43 chr3:42585200-42587200 Enhancers Brain Hippocampus Middle brain
44 chr3:42585200-42587800 Enhancers Fetal Stomach stomach
45 chr3:42585200-42590400 Weak transcription Esophagus oesophagus
46 chr3:42585400-42587000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
47 chr3:42585400-42588000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr3:42585600-42587800 Weak transcription Thymus Thymus
49 chr3:42585600-42589200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
50 chr3:42585800-42587000 Enhancers Brain Substantia Nigra brain

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