Variant report
| Variant | rs13067987 |
|---|---|
| Chromosome Location | chr3:42651209-42651210 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:42643200-42672800 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 2 | chr3:42643600-42675000 | Weak transcription | Aorta | Aorta |
| 3 | chr3:42643800-42671200 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 4 | chr3:42644000-42660000 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 5 | chr3:42644000-42671000 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 6 | chr3:42644000-42671200 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 7 | chr3:42644000-42671400 | Weak transcription | HSMMtube | muscle |
| 8 | chr3:42644000-42672000 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 9 | chr3:42644200-42655200 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 10 | chr3:42644200-42663200 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 11 | chr3:42644200-42672400 | Weak transcription | Fetal Kidney | kidney |
| 12 | chr3:42644400-42653600 | Strong transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 13 | chr3:42644800-42660000 | Weak transcription | Colonic Mucosa | Colon |
| 14 | chr3:42644800-42660200 | Weak transcription | NH-A | brain |
| 15 | chr3:42645200-42652200 | Strong transcription | Primary hematopoietic stem cells short term culture | blood |
| 16 | chr3:42645200-42660200 | Weak transcription | HMEC | breast |
| 17 | chr3:42645600-42653400 | Strong transcription | Monocytes-CD14+_RO01746 | blood |
| 18 | chr3:42646000-42672000 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 19 | chr3:42646200-42651800 | Strong transcription | Primary neutrophils fromperipheralblood | blood |
| 20 | chr3:42646200-42654000 | Genic enhancers | Primary T helper cells PMA-I stimulated | -- |
| 21 | chr3:42647000-42671400 | Weak transcription | NHEK | skin |
| 22 | chr3:42647200-42668600 | Weak transcription | Brain Germinal Matrix | brain |
| 23 | chr3:42647200-42688200 | Strong transcription | Primary monocytes fromperipheralblood | blood |
| 24 | chr3:42647400-42651600 | Strong transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 25 | chr3:42647400-42654600 | Weak transcription | Right Ventricle | heart |
| 26 | chr3:42647400-42672000 | Weak transcription | NHLF | lung |
| 27 | chr3:42647600-42652600 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 28 | chr3:42647600-42654600 | Weak transcription | A549 | lung |
| 29 | chr3:42647600-42672000 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 30 | chr3:42647600-42677600 | Weak transcription | Gastric | stomach |
| 31 | chr3:42647800-42652200 | Strong transcription | HUES64 Cell Line | embryonic stem cell |
| 32 | chr3:42648000-42651400 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 33 | chr3:42648000-42651800 | Strong transcription | Fetal Intestine Large | intestine |
| 34 | chr3:42648000-42653600 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 35 | chr3:42648200-42651800 | Strong transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 36 | chr3:42648200-42655400 | Enhancers | Primary T killer naive cells fromperipheralblood | blood |
| 37 | chr3:42648600-42651400 | Strong transcription | Hela-S3 | cervix |
| 38 | chr3:42648800-42672600 | Weak transcription | Fetal Brain Female | brain |
| 39 | chr3:42649000-42657600 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 40 | chr3:42649200-42651400 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 41 | chr3:42649200-42653600 | Strong transcription | Fetal Intestine Small | intestine |
| 42 | chr3:42649400-42657000 | Weak transcription | Primary B cells from cord blood | blood |
| 43 | chr3:42649600-42652600 | Strong transcription | Primary B cells from peripheral blood | blood |
| 44 | chr3:42649800-42651400 | Enhancers | Duodenum Smooth Muscle | Duodenum |
| 45 | chr3:42649800-42652600 | Genic enhancers | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 46 | chr3:42649800-42652800 | Strong transcription | iPS-20b Cell Line | embryonic stem cell |
| 47 | chr3:42649800-42653000 | Genic enhancers | Primary T helper cells fromperipheralblood | blood |
| 48 | chr3:42649800-42654400 | Enhancers | Primary T helper memory cells from peripheral blood 2 | blood |
| 49 | chr3:42649800-42671200 | Weak transcription | Fetal Brain Male | brain |
| 50 | chr3:42650000-42651600 | Weak transcription | Primary Natural Killer cells fromperipheralblood | blood |
