Variant report

Variant rs60348477
Chromosome Location chr3:42643738-42643739
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:42640800-42643800 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
2 chr3:42641200-42643800 Active TSS H1 Cell Line embryonic stem cell
3 chr3:42641200-42643800 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
4 chr3:42641200-42643800 Active TSS iPS-15b Cell Line embryonic stem cell
5 chr3:42641200-42643800 Active TSS iPS-20b Cell Line embryonic stem cell
6 chr3:42641200-42643800 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
7 chr3:42641200-42643800 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr3:42641200-42643800 Active TSS Brain Dorsolateral Prefrontal Cortex brain
9 chr3:42641200-42643800 Active TSS Fetal Intestine Small intestine
10 chr3:42641200-42643800 Active TSS Pancreatic Islets Pancreatic Islet
11 chr3:42641200-42643800 Active TSS A549 lung
12 chr3:42641200-42643800 Active TSS HSMMtube muscle
13 chr3:42641200-42643800 Active TSS NHLF lung
14 chr3:42641200-42644000 Active TSS ES-I3 Cell Line embryonic stem cell
15 chr3:42641200-42644000 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
16 chr3:42641200-42644000 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
17 chr3:42641200-42644200 Active TSS HUES48 Cell Line embryonic stem cell
18 chr3:42641200-42644200 Active TSS HMEC breast
19 chr3:42641400-42643800 Active TSS ES-WA7 Cell Line embryonic stem cell
20 chr3:42641400-42643800 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
21 chr3:42641400-42643800 Active TSS H9 Cell Line embryonic stem cell
22 chr3:42641400-42643800 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
23 chr3:42641400-42643800 Active TSS Psoas Muscle Psoas
24 chr3:42641400-42643800 Active TSS Right Ventricle heart
25 chr3:42641400-42644000 Active TSS Left Ventricle heart
26 chr3:42642200-42644000 Flanking Active TSS Primary B cells from cord blood blood
27 chr3:42642600-42643800 Flanking Active TSS Monocytes-CD14+_RO01746 blood
28 chr3:42642600-42644000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
29 chr3:42642800-42643800 Flanking Active TSS Primary T cells from cord blood blood
30 chr3:42642800-42643800 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
31 chr3:42642800-42643800 Active TSS Right Atrium heart
32 chr3:42642800-42644000 Flanking Active TSS Primary hematopoietic stem cells blood
33 chr3:42642800-42644000 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
34 chr3:42642800-42644000 Flanking Active TSS Primary T helper cells fromperipheralblood blood
35 chr3:42642800-42644000 Flanking Active TSS Brain Hippocampus Middle brain
36 chr3:42642800-42644000 Flanking Active TSS Rectal Mucosa Donor 31 rectum
37 chr3:42642800-42644000 Flanking Active TSS Skeletal Muscle Male skeletal muscle
38 chr3:42642800-42644000 Flanking Active TSS Skeletal Muscle Female skeletal muscle
39 chr3:42642800-42644200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
40 chr3:42642800-42646200 Weak transcription Spleen Spleen
41 chr3:42643000-42643800 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
42 chr3:42643000-42643800 Weak transcription Gastric stomach
43 chr3:42643000-42644000 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
44 chr3:42643000-42644000 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
45 chr3:42643000-42644000 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
46 chr3:42643000-42644000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
47 chr3:42643000-42644000 Flanking Active TSS Cortex derived primary cultured neurospheres brain
48 chr3:42643000-42644000 Flanking Active TSS Adipose Nuclei Adipose
49 chr3:42643000-42644000 Flanking Active TSS Liver Liver
50 chr3:42643000-42644000 Flanking Active TSS Brain Substantia Nigra brain

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