Variant report

Variant	rs56043945
Chromosome Location	chr6:133685059-133685060
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 29 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs1336530	1.00[AFR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2094198	0.86[EUR][1000 genomes]
rs58715540	0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs714176	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs714177	1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs72993941	0.86[EUR][1000 genomes]
rs72993988	0.86[EUR][1000 genomes]
rs72995906	1.00[AFR][1000 genomes];0.84[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs72995908	1.00[AFR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs72995914	1.00[AFR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs72996001	1.00[AFR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72997742	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs742297	1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs742298	1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7749769	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7749773	1.00[AFR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7765967	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7766140	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9373049	0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9373050	1.00[AFR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9375960	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9389068	1.00[AFR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9389069	1.00[AFR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9389072	1.00[AFR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9389073	1.00[AFR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9389075	1.00[AFR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9389076	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9402507	1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9402509	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:133673600-133687600	Weak transcription	Hela-S3	cervix
2	chr6:133674000-133689800	Weak transcription	A549	lung
3	chr6:133679000-133687400	Weak transcription	Cortex derived primary cultured neurospheres	brain
4	chr6:133682000-133686600	Weak transcription	Fetal Muscle Leg	muscle
5	chr6:133682600-133687000	Weak transcription	Skeletal Muscle Male	skeletal muscle
6	chr6:133684400-133688200	Weak transcription	Psoas Muscle	Psoas
7	chr6:133684600-133717800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
8	chr6:133685000-133686000	Enhancers	Skeletal Muscle Female	skeletal muscle

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