Variant report
| Variant | rs56053416 |
|---|---|
| Chromosome Location | chr5:127296026-127296027 |
| allele | A/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr5:127285800-127303800 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 2 | chr5:127287400-127297200 | Weak transcription | Primary B cells from peripheral blood | blood |
| 3 | chr5:127290600-127332000 | Weak transcription | Aorta | Aorta |
| 4 | chr5:127290800-127297400 | Weak transcription | Spleen | Spleen |
| 5 | chr5:127292200-127297600 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
| 6 | chr5:127292400-127296400 | Enhancers | Left Ventricle | heart |
| 7 | chr5:127292600-127296400 | Enhancers | Cortex derived primary cultured neurospheres | brain |
| 8 | chr5:127292600-127296400 | Enhancers | HepG2 | liver |
| 9 | chr5:127292600-127298400 | Enhancers | Fetal Intestine Large | intestine |
| 10 | chr5:127292600-127298600 | Enhancers | Fetal Intestine Small | intestine |
| 11 | chr5:127292800-127296200 | Enhancers | Brain Substantia Nigra | brain |
| 12 | chr5:127292800-127296400 | Enhancers | Brain Hippocampus Middle | brain |
| 13 | chr5:127292800-127297200 | Enhancers | Fetal Lung | lung |
| 14 | chr5:127292800-127297600 | Enhancers | Brain Inferior Temporal Lobe | brain |
| 15 | chr5:127292800-127297800 | Enhancers | HUVEC | blood vessel |
| 16 | chr5:127292800-127298400 | Enhancers | Fetal Heart | heart |
| 17 | chr5:127292800-127314400 | Weak transcription | Pancreas | Pancrea |
| 18 | chr5:127293000-127297600 | Enhancers | Duodenum Smooth Muscle | Duodenum |
| 19 | chr5:127293000-127298600 | Enhancers | Stomach Mucosa | stomach |
| 20 | chr5:127293200-127297400 | Weak transcription | Gastric | stomach |
| 21 | chr5:127293200-127301800 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 22 | chr5:127293200-127301800 | Weak transcription | Ovary | ovary |
| 23 | chr5:127293200-127303600 | Weak transcription | Esophagus | oesophagus |
| 24 | chr5:127293400-127296200 | Weak transcription | Right Ventricle | heart |
| 25 | chr5:127293400-127297200 | Weak transcription | Right Atrium | heart |
| 26 | chr5:127293600-127301800 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 27 | chr5:127293800-127296200 | Enhancers | Brain Angular Gyrus | brain |
| 28 | chr5:127294000-127296400 | Enhancers | Fetal Thymus | thymus |
| 29 | chr5:127294200-127297200 | Enhancers | Dnd41 | blood |
| 30 | chr5:127294200-127297600 | Enhancers | Adipose Nuclei | Adipose |
| 31 | chr5:127294200-127297600 | Enhancers | Rectal Smooth Muscle | rectum |
| 32 | chr5:127294400-127296200 | Enhancers | Fetal Stomach | stomach |
| 33 | chr5:127294400-127296400 | Enhancers | Ganglion Eminence derived primary cultured neurospheres | brain |
| 34 | chr5:127294400-127302800 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 35 | chr5:127294600-127296200 | Enhancers | Primary hematopoietic stem cells | blood |
| 36 | chr5:127294600-127296200 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
| 37 | chr5:127294600-127296400 | Enhancers | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 38 | chr5:127294600-127296400 | Enhancers | Hela-S3 | cervix |
| 39 | chr5:127294600-127296400 | Enhancers | HMEC | breast |
| 40 | chr5:127294600-127296400 | Enhancers | NHEK | skin |
| 41 | chr5:127294800-127296200 | Enhancers | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 42 | chr5:127294800-127296400 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 43 | chr5:127294800-127296400 | Enhancers | Muscle Satellite Cultured Cells | -- |
| 44 | chr5:127294800-127297000 | Weak transcription | Stomach Smooth Muscle | stomach |
| 45 | chr5:127294800-127297200 | Weak transcription | Thymus | Thymus |
| 46 | chr5:127295000-127296200 | Enhancers | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 47 | chr5:127295000-127296200 | Enhancers | GM12878-XiMat | blood |
| 48 | chr5:127295000-127296200 | Enhancers | NHLF | lung |
| 49 | chr5:127295000-127296400 | Enhancers | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 50 | chr5:127295000-127296800 | Enhancers | Primary neutrophils fromperipheralblood | blood |
