The 2.0 version of rSNPBase

Variant report

Variant rs6897057
Chromosome Location chr5:127332160-127332161
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:127297800-127358400 Weak transcription Primary hematopoietic stem cells blood
2 chr5:127304000-127333400 Weak transcription Primary T cells from cord blood blood
3 chr5:127306600-127333200 Weak transcription Psoas Muscle Psoas
4 chr5:127323800-127338200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
5 chr5:127324000-127333200 Weak transcription Left Ventricle heart
6 chr5:127324000-127333200 Weak transcription Pancreas Pancrea
7 chr5:127324000-127350400 Weak transcription HSMMtube muscle
8 chr5:127324200-127332200 Weak transcription Brain Hippocampus Middle brain
9 chr5:127324200-127334800 Weak transcription K562 blood
10 chr5:127324200-127342800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
11 chr5:127324400-127334400 Weak transcription Gastric stomach
12 chr5:127324400-127337400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
13 chr5:127324400-127337400 Weak transcription HMEC breast
14 chr5:127324400-127337600 Weak transcription NHEK skin
15 chr5:127324400-127354800 Weak transcription Breast Myoepithelial Primary Cells Breast
16 chr5:127324400-127358400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
17 chr5:127326200-127334800 Weak transcription Rectal Mucosa Donor 29 rectum
18 chr5:127326400-127359400 Weak transcription GM12878-XiMat blood
19 chr5:127327800-127359400 Weak transcription Primary T helper cells fromperipheralblood blood
20 chr5:127328200-127379800 Weak transcription Esophagus oesophagus
21 chr5:127328400-127333000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
22 chr5:127329400-127351600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr5:127329600-127333200 Weak transcription Small Intestine intestine
24 chr5:127329800-127334800 Weak transcription A549 lung
25 chr5:127330200-127337400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
26 chr5:127330400-127337400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr5:127330800-127333000 Enhancers Colon Smooth Muscle Colon
28 chr5:127331400-127332200 Enhancers Right Atrium heart
29 chr5:127331400-127332800 Enhancers Stomach Smooth Muscle stomach
30 chr5:127331400-127333000 Weak transcription Brain Angular Gyrus brain
31 chr5:127331400-127333000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
32 chr5:127331400-127333200 Weak transcription Right Ventricle heart
33 chr5:127331400-127333800 Enhancers Rectal Smooth Muscle rectum
34 chr5:127331600-127333200 Weak transcription Fetal Muscle Leg muscle
35 chr5:127331600-127334200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
36 chr5:127331600-127334400 Weak transcription Primary B cells from peripheral blood blood
37 chr5:127331800-127333600 Enhancers Ovary ovary
38 chr5:127331800-127335600 Weak transcription Fetal Adrenal Gland Adrenal Gland
39 chr5:127331800-127345000 Weak transcription Cortex derived primary cultured neurospheres brain
40 chr5:127332000-127332400 Strong transcription Primary B cells from cord blood blood
41 chr5:127332000-127332400 Strong transcription Aorta Aorta
42 chr5:127332000-127335400 Enhancers Stomach Mucosa stomach

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Last update: Aug 31, 2015