Variant report

Variant	rs56055752
Chromosome Location	chr8:60699507-60699508
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs16925122	1.00[AMR][1000 genomes]
rs16925218	1.00[EUR][1000 genomes]
rs4351408	1.00[EUR][1000 genomes]
rs59240261	1.00[EUR][1000 genomes]
rs60478918	1.00[EUR][1000 genomes]
rs7001191	1.00[EUR][1000 genomes]
rs73251501	1.00[EUR][1000 genomes]
rs73682834	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9657028	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1030564	chr8:60445016-60752655	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
2	nsv539630	chr8:60445016-60752655	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:60699000-60700000	Enhancers	HMEC	breast
2	chr8:60699000-60701600	Enhancers	Pancreatic Islets	Pancreatic Islet
3	chr8:60699200-60699800	Enhancers	Osteobl	bone
4	chr8:60699200-60700000	Enhancers	Hela-S3	cervix

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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