Variant report

Variant rs56059998
Chromosome Location chr9:140699711-140699712
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:140649800-140712400 Weak transcription Psoas Muscle Psoas
2 chr9:140650200-140700000 Strong transcription Primary T cells from cord blood blood
3 chr9:140664200-140701000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
4 chr9:140664600-140708000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
5 chr9:140664800-140700000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr9:140665000-140700000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
7 chr9:140665200-140702000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
8 chr9:140665400-140700800 Strong transcription Fetal Stomach stomach
9 chr9:140668200-140700000 Strong transcription Fetal Brain Female brain
10 chr9:140679600-140700000 Strong transcription Fetal Muscle Leg muscle
11 chr9:140679600-140710200 Strong transcription Primary hematopoietic stem cells short term culture blood
12 chr9:140680600-140700000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
13 chr9:140681000-140711400 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
14 chr9:140681200-140700000 Strong transcription HUES6 Cell Line embryonic stem cell
15 chr9:140681200-140704400 Strong transcription Fetal Muscle Trunk muscle
16 chr9:140681200-140704600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
17 chr9:140681400-140699800 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
18 chr9:140681400-140699800 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
19 chr9:140681600-140700200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
20 chr9:140683000-140700200 Strong transcription Monocytes-CD14+_RO01746 blood
21 chr9:140683600-140704200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr9:140683800-140700000 Strong transcription iPS-20b Cell Line embryonic stem cell
23 chr9:140684200-140699800 Strong transcription Fetal Intestine Small intestine
24 chr9:140684200-140703200 Strong transcription Primary B cells from peripheral blood blood
25 chr9:140684600-140699800 Strong transcription HUES64 Cell Line embryonic stem cell
26 chr9:140684600-140700000 Strong transcription HUES48 Cell Line embryonic stem cell
27 chr9:140684600-140702800 Strong transcription Fetal Intestine Large intestine
28 chr9:140684800-140699800 Strong transcription Duodenum Smooth Muscle Duodenum
29 chr9:140684800-140699800 Strong transcription Skeletal Muscle Female skeletal muscle
30 chr9:140684800-140700000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
31 chr9:140684800-140700000 Strong transcription Adipose Nuclei Adipose
32 chr9:140684800-140700000 Strong transcription Duodenum Mucosa Duodenum
33 chr9:140684800-140701800 Strong transcription Stomach Smooth Muscle stomach
34 chr9:140685200-140699800 Strong transcription Rectal Smooth Muscle rectum
35 chr9:140685200-140701200 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
36 chr9:140685400-140699800 Strong transcription Rectal Mucosa Donor 29 rectum
37 chr9:140685800-140700000 Strong transcription GM12878-XiMat blood
38 chr9:140686800-140700000 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
39 chr9:140687000-140699800 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr9:140687000-140700000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
41 chr9:140687200-140700000 Strong transcription Fetal Lung lung
42 chr9:140687200-140700000 Strong transcription Osteobl bone
43 chr9:140687600-140699800 Strong transcription Spleen Spleen
44 chr9:140688000-140701000 Strong transcription Fetal Adrenal Gland Adrenal Gland
45 chr9:140688200-140702200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
46 chr9:140688200-140710200 Weak transcription K562 blood
47 chr9:140689000-140699800 Strong transcription Brain Inferior Temporal Lobe brain
48 chr9:140689400-140699800 Strong transcription Brain Cingulate Gyrus brain
49 chr9:140689600-140700000 Strong transcription Cortex derived primary cultured neurospheres brain
50 chr9:140689600-140700000 Strong transcription Brain Substantia Nigra brain

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