The 2.0 version of rSNPBase

Variant report

Variant rs56111444
Chromosome Location chr19:39483435-39483436
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:21 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:39480000-39483800 Weak transcription Breast Myoepithelial Primary Cells Breast
2 chr19:39480000-39503400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr19:39480200-39483800 Weak transcription HSMMtube muscle
4 chr19:39480200-39486600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr19:39481000-39516000 Weak transcription Brain Angular Gyrus brain
6 chr19:39481600-39484400 Enhancers HMEC breast
7 chr19:39481800-39484600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr19:39482200-39483600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
9 chr19:39482200-39483600 Weak transcription A549 lung
10 chr19:39482200-39483600 Weak transcription Hela-S3 cervix
11 chr19:39482200-39483600 Weak transcription NHDF-Ad bronchial
12 chr19:39482200-39483800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
13 chr19:39482400-39483800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr19:39482400-39483800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
15 chr19:39482400-39484400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr19:39482600-39483800 Weak transcription Muscle Satellite Cultured Cells --
17 chr19:39483000-39484400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr19:39483200-39484400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr19:39483200-39484600 Enhancers NHEK skin
20 chr19:39483200-39484800 Enhancers HUVEC blood vessel
21 chr19:39483400-39484400 Enhancers Osteobl bone

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Last update: Aug 31, 2015