Variant report

Variant rs56111606
Chromosome Location chr5:124342551-124342552
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:32 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:124323400-124348600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr5:124336800-124343000 Enhancers HUES48 Cell Line embryonic stem cell
3 chr5:124337000-124343000 Enhancers ES-I3 Cell Line embryonic stem cell
4 chr5:124337000-124343000 Enhancers HUES64 Cell Line embryonic stem cell
5 chr5:124337600-124342600 Enhancers iPS-20b Cell Line embryonic stem cell
6 chr5:124337800-124342600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
7 chr5:124337800-124342800 Enhancers HUES6 Cell Line embryonic stem cell
8 chr5:124338000-124343000 Enhancers iPS-15b Cell Line embryonic stem cell
9 chr5:124338400-124343000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr5:124338400-124343000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
11 chr5:124338800-124342800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
12 chr5:124340200-124343000 Enhancers Primary hematopoietic stem cells short term culture blood
13 chr5:124340400-124343000 Enhancers Fetal Brain Male brain
14 chr5:124340400-124343600 Enhancers Primary B cells from peripheral blood blood
15 chr5:124340600-124342600 Enhancers Fetal Lung lung
16 chr5:124340600-124343000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
17 chr5:124340800-124342800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
18 chr5:124341400-124343000 Enhancers Primary hematopoietic stem cells blood
19 chr5:124341600-124342600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
20 chr5:124341600-124342600 Flanking Active TSS GM12878-XiMat blood
21 chr5:124341600-124343000 Enhancers Fetal Thymus thymus
22 chr5:124341800-124342600 Enhancers Primary T cells from cord blood blood
23 chr5:124342000-124342800 Enhancers Thymus Thymus
24 chr5:124342000-124347000 Weak transcription Fetal Kidney kidney
25 chr5:124342200-124342600 Enhancers Dnd41 blood
26 chr5:124342200-124342800 Enhancers iPS-18 Cell Line embryonic stem cell
27 chr5:124342200-124346000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
28 chr5:124342200-124346000 Weak transcription Fetal Muscle Leg muscle
29 chr5:124342200-124346600 Weak transcription Pancreatic Islets Pancreatic Islet
30 chr5:124342200-124347000 Weak transcription Fetal Intestine Large intestine
31 chr5:124342400-124342600 Flanking Active TSS Primary B cells from cord blood blood
32 chr5:124342400-124348600 Weak transcription H9 Cell Line embryonic stem cell

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