Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:124318965..124321778-chr5:124328719..124330379,2	K562	blood:

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10051837	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10067540	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10069295	1.00[ASN][1000 genomes]
rs10069495	1.00[ASN][1000 genomes]
rs10070651	1.00[ASN][1000 genomes]
rs10070961	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10071979	1.00[ASN][1000 genomes]
rs10072930	1.00[ASN][1000 genomes]
rs13169162	1.00[ASN][1000 genomes]
rs13359584	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28484892	1.00[ASN][1000 genomes]
rs28887500	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56111606	1.00[ASN][1000 genomes]
rs57050857	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60700802	1.00[ASN][1000 genomes]
rs6860106	1.00[ASN][1000 genomes]
rs6867459	1.00[ASN][1000 genomes]
rs6883243	1.00[ASN][1000 genomes]
rs6887240	1.00[ASN][1000 genomes]
rs72785247	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72785252	1.00[ASN][1000 genomes]
rs73782570	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv882822	chr5:124250018-124449375	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Active TSS Strong transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
2	nsv830474	chr5:124263628-124431299	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv599657	chr5:124284253-124330522	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS Strong transcription	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:124317200-124319600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
2	chr5:124317200-124320000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
3	chr5:124317800-124320400	Weak transcription	Fetal Kidney	kidney
4	chr5:124318000-124319800	ZNF genes & repeats	ES-I3 Cell Line	embryonic stem cell
5	chr5:124318200-124324000	Weak transcription	Gastric	stomach
6	chr5:124318400-124319600	Weak transcription	Primary B cells from cord blood	blood
7	chr5:124318400-124322200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
8	chr5:124318800-124319600	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
9	chr5:124318800-124319600	ZNF genes & repeats	HUES6 Cell Line	embryonic stem cell
10	chr5:124318800-124320000	ZNF genes & repeats	Primary B cells from peripheral blood	blood
11	chr5:124319000-124319600	ZNF genes & repeats	HUES64 Cell Line	embryonic stem cell
12	chr5:124319200-124319600	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
13	chr5:124319200-124319800	ZNF genes & repeats	Fetal Intestine Small	intestine
14	chr5:124319200-124320000	ZNF genes & repeats	H1 Cell Line	embryonic stem cell
15	chr5:124319400-124320000	ZNF genes & repeats	Foreskin Keratinocyte Primary Cells skin02	Skin

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