Variant report

Variant rs56154949
Chromosome Location chr6:13302755-13302756
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:13287000-13303600 Genic enhancers Foreskin Melanocyte Primary Cells skin03 Skin
2 chr6:13288400-13302800 Weak transcription Primary T killer memory cells from peripheral blood blood
3 chr6:13288600-13321000 Weak transcription Pancreatic Islets Pancreatic Islet
4 chr6:13288600-13326400 Strong transcription Primary T cells from cord blood blood
5 chr6:13289800-13327000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr6:13290200-13302800 Weak transcription NHEK skin
7 chr6:13290400-13310400 Strong transcription Dnd41 blood
8 chr6:13290600-13302800 Weak transcription Stomach Mucosa stomach
9 chr6:13291000-13302800 Strong transcription Fetal Stomach stomach
10 chr6:13291200-13303000 Strong transcription Fetal Intestine Small intestine
11 chr6:13291200-13310400 Strong transcription Primary T helper naive cells fromperipheralblood blood
12 chr6:13291400-13303600 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
13 chr6:13291600-13305800 Strong transcription Thymus Thymus
14 chr6:13291800-13320400 Weak transcription ES-WA7 Cell Line embryonic stem cell
15 chr6:13292000-13326000 Strong transcription Breast Myoepithelial Primary Cells Breast
16 chr6:13292600-13326600 Strong transcription HUES64 Cell Line embryonic stem cell
17 chr6:13293000-13302800 Strong transcription Fetal Lung lung
18 chr6:13293200-13305400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
19 chr6:13295000-13304800 Weak transcription ES-I3 Cell Line embryonic stem cell
20 chr6:13295200-13305200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
21 chr6:13295600-13302800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
22 chr6:13295800-13302800 Weak transcription HMEC breast
23 chr6:13295800-13303000 Weak transcription iPS-15b Cell Line embryonic stem cell
24 chr6:13297600-13303200 Strong transcription Primary mononuclear cells fromperipheralblood Blood
25 chr6:13298000-13309600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
26 chr6:13298200-13326800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
27 chr6:13298400-13302800 Strong transcription Brain Germinal Matrix brain
28 chr6:13298400-13303400 Strong transcription Primary T helper cells fromperipheralblood blood
29 chr6:13298600-13303000 Weak transcription Primary T helper naive cells from peripheral blood blood
30 chr6:13298600-13303200 Strong transcription Primary T regulatory cells fromperipheralblood blood
31 chr6:13298800-13304600 Weak transcription Primary T killer naive cells fromperipheralblood blood
32 chr6:13299000-13303400 Strong transcription Liver Liver
33 chr6:13299400-13303600 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
34 chr6:13299600-13306400 Strong transcription H9 Cell Line embryonic stem cell
35 chr6:13299600-13326600 Strong transcription HUES6 Cell Line embryonic stem cell
36 chr6:13299800-13326400 Strong transcription iPS-20b Cell Line embryonic stem cell
37 chr6:13300000-13303000 Strong transcription Cortex derived primary cultured neurospheres brain
38 chr6:13300000-13306400 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
39 chr6:13300200-13309200 Strong transcription H1 Cell Line embryonic stem cell
40 chr6:13300200-13311800 Strong transcription Primary T helper cells PMA-I stimulated --
41 chr6:13300200-13327000 Strong transcription HUES48 Cell Line embryonic stem cell
42 chr6:13300400-13303600 Strong transcription Fetal Kidney kidney
43 chr6:13300600-13303000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
44 chr6:13300600-13304600 Genic enhancers HepG2 liver
45 chr6:13300800-13303000 Weak transcription Placenta Amnion Placenta Amnion
46 chr6:13300800-13303200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
47 chr6:13300800-13304000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
48 chr6:13301000-13302800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
49 chr6:13301000-13306400 Strong transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr6:13301200-13302800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin

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