Variant report

Variant rs56162044
Chromosome Location chr12:45569438-45569439
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:45560200-45570400 Weak transcription Duodenum Smooth Muscle Duodenum
2 chr12:45560800-45571200 Weak transcription Psoas Muscle Psoas
3 chr12:45561000-45569600 Weak transcription Aorta Aorta
4 chr12:45561600-45571200 Weak transcription Skeletal Muscle Female skeletal muscle
5 chr12:45563000-45569600 Weak transcription Left Ventricle heart
6 chr12:45564400-45569600 Weak transcription Primary T helper naive cells fromperipheralblood blood
7 chr12:45565400-45586400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
8 chr12:45565600-45585000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr12:45565800-45570800 Weak transcription Primary T cells from cord blood blood
10 chr12:45566200-45569600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
11 chr12:45566200-45572000 Weak transcription Primary T cells fromperipheralblood blood
12 chr12:45566400-45570200 Weak transcription Primary T helper cells fromperipheralblood blood
13 chr12:45567000-45572600 Weak transcription A549 lung
14 chr12:45567200-45569600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
15 chr12:45567800-45571600 ZNF genes & repeats Fetal Intestine Small intestine
16 chr12:45568000-45572200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
17 chr12:45568200-45569600 Weak transcription Primary B cells from peripheral blood blood
18 chr12:45568200-45569600 Strong transcription Fetal Stomach stomach
19 chr12:45568200-45571600 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
20 chr12:45568200-45571600 ZNF genes & repeats Fetal Intestine Large intestine
21 chr12:45568200-45574200 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr12:45568400-45569600 Strong transcription Lung lung
23 chr12:45568400-45569600 Weak transcription Dnd41 blood
24 chr12:45568400-45570000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr12:45568400-45570400 ZNF genes & repeats Fetal Adrenal Gland Adrenal Gland
26 chr12:45568400-45571600 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
27 chr12:45568600-45570600 Strong transcription Monocytes-CD14+_RO01746 blood
28 chr12:45568600-45571400 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
29 chr12:45568800-45571000 Weak transcription Primary T helper cells PMA-I stimulated --
30 chr12:45569000-45569600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr12:45569000-45569600 Strong transcription Adipose Nuclei Adipose
32 chr12:45569000-45569800 Strong transcription Primary T helper 17 cells PMA-I stimulated --
33 chr12:45569000-45570000 ZNF genes & repeats H1 Cell Line embryonic stem cell
34 chr12:45569000-45570000 Strong transcription Stomach Smooth Muscle stomach
35 chr12:45569000-45574200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr12:45569200-45569600 Strong transcription Breast Myoepithelial Primary Cells Breast
37 chr12:45569200-45570000 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
38 chr12:45569200-45570000 ZNF genes & repeats Primary monocytes fromperipheralblood blood
39 chr12:45569200-45570000 ZNF genes & repeats Primary B cells from cord blood blood
40 chr12:45569200-45570000 Strong transcription Ovary ovary
41 chr12:45569200-45570000 Strong transcription Placenta Amnion Placenta Amnion
42 chr12:45569200-45570400 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
43 chr12:45569200-45571400 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
44 chr12:45569200-45571600 ZNF genes & repeats Thymus Thymus
45 chr12:45569200-45571800 ZNF genes & repeats Primary hematopoietic stem cells blood
46 chr12:45569200-45571800 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
47 chr12:45569200-45571800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
48 chr12:45569400-45569600 Weak transcription Fetal Thymus thymus
49 chr12:45569400-45570200 ZNF genes & repeats Primary Natural Killer cells fromperipheralblood blood
50 chr12:45569400-45571400 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell

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