Variant report

Variant	rs56177813
Chromosome Location	chr10:18623696-18623697
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs12240995	0.83[EUR][1000 genomes]
rs17610062	0.86[AFR][1000 genomes];0.87[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs17610159	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs17610248	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs17683651	0.90[EUR][1000 genomes]
rs2357929	0.83[EUR][1000 genomes]
rs4748456	0.85[EUR][1000 genomes]
rs56346389	0.86[AFR][1000 genomes];0.88[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs56346888	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes]

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:18620400-18623800	Enhancers	Fetal Heart	heart
2	chr10:18621800-18623800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
3	chr10:18622600-18623800	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
4	chr10:18622800-18629200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
5	chr10:18623000-18623800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
6	chr10:18623000-18623800	Enhancers	Right Ventricle	heart
7	chr10:18623200-18623800	Enhancers	Liver	Liver
8	chr10:18623200-18623800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
9	chr10:18623400-18623800	Enhancers	Aorta	Aorta
10	chr10:18623400-18623800	Enhancers	Ovary	ovary
11	chr10:18623400-18623800	Enhancers	Rectal Smooth Muscle	rectum
12	chr10:18623400-18624000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
13	chr10:18623600-18623800	Enhancers	Stomach Smooth Muscle	stomach
14	chr10:18623600-18624000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
15	chr10:18623600-18628800	Weak transcription	Colon Smooth Muscle	Colon
16	chr10:18623600-18629200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
17	chr10:18623600-18629400	Weak transcription	Left Ventricle	heart
18	chr10:18623600-18629400	Weak transcription	Osteobl	bone

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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