The 2.0 version of rSNPBase

Variant report

Variant rs56221144
Chromosome Location chr17:34192406-34192407
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:69 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:34170200-34192800 Weak transcription Small Intestine intestine
2 chr17:34172200-34193600 Weak transcription Right Ventricle heart
3 chr17:34172800-34193600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr17:34175600-34193000 Weak transcription NH-A brain
5 chr17:34175600-34193600 Weak transcription Rectal Smooth Muscle rectum
6 chr17:34175600-34202400 Weak transcription Primary T helper cells PMA-I stimulated --
7 chr17:34176400-34192600 Weak transcription Fetal Intestine Small intestine
8 chr17:34176800-34193200 Weak transcription Fetal Brain Female brain
9 chr17:34177200-34202400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
10 chr17:34177400-34193000 Weak transcription Primary monocytes fromperipheralblood blood
11 chr17:34177400-34193200 Weak transcription Primary hematopoietic stem cells short term culture blood
12 chr17:34177400-34193200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
13 chr17:34177400-34193200 Weak transcription Duodenum Smooth Muscle Duodenum
14 chr17:34177400-34198400 Weak transcription Primary B cells from peripheral blood blood
15 chr17:34177800-34198200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
16 chr17:34178000-34193600 Weak transcription Left Ventricle heart
17 chr17:34178200-34193200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
18 chr17:34179000-34193400 Weak transcription Osteobl bone
19 chr17:34179000-34203800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr17:34180200-34193400 Weak transcription HUVEC blood vessel
21 chr17:34180600-34198200 Weak transcription ES-I3 Cell Line embryonic stem cell
22 chr17:34180800-34202000 Weak transcription GM12878-XiMat blood
23 chr17:34182800-34192800 Weak transcription Cortex derived primary cultured neurospheres brain
24 chr17:34182800-34193000 Weak transcription HSMMtube muscle
25 chr17:34183800-34192600 Weak transcription Esophagus oesophagus
26 chr17:34183800-34192600 Weak transcription NHLF lung
27 chr17:34183800-34193000 Weak transcription A549 lung
28 chr17:34183800-34193400 Weak transcription Breast Myoepithelial Primary Cells Breast
29 chr17:34183800-34193400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr17:34183800-34193600 Weak transcription Aorta Aorta
31 chr17:34183800-34198200 Weak transcription Pancreas Pancrea
32 chr17:34184000-34192800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr17:34184000-34192800 Weak transcription Brain Cingulate Gyrus brain
34 chr17:34184000-34193200 Weak transcription Brain Inferior Temporal Lobe brain
35 chr17:34184200-34192800 Weak transcription Muscle Satellite Cultured Cells --
36 chr17:34184200-34192800 Weak transcription Brain Germinal Matrix brain
37 chr17:34184200-34193000 Weak transcription HSMM muscle
38 chr17:34184400-34193000 Weak transcription Brain Hippocampus Middle brain
39 chr17:34184400-34193200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
40 chr17:34184400-34193400 Weak transcription Placenta Placenta
41 chr17:34184600-34192600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
42 chr17:34184600-34192800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
43 chr17:34184600-34193400 Weak transcription Fetal Stomach stomach
44 chr17:34185400-34193200 Weak transcription Brain Substantia Nigra brain
45 chr17:34185800-34193200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
46 chr17:34185800-34206800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr17:34186000-34193000 Weak transcription NHEK skin
48 chr17:34186600-34198400 Weak transcription Fetal Muscle Leg muscle
49 chr17:34186800-34193400 Weak transcription Brain Angular Gyrus brain
50 chr17:34186800-34201600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain

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Last update: Aug 31, 2015