Variant report
| Variant | rs56227688 |
|---|---|
| Chromosome Location | chr7:86274210-86274211 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr7:86272600-86274600 | Bivalent/Poised TSS | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 2 | chr7:86272600-86275000 | Bivalent/Poised TSS | iPS-15b Cell Line | embryonic stem cell |
| 3 | chr7:86272600-86275200 | Bivalent/Poised TSS | iPS-20b Cell Line | embryonic stem cell |
| 4 | chr7:86272600-86275400 | Active TSS | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 5 | chr7:86272600-86275600 | Active TSS | Fetal Brain Male | brain |
| 6 | chr7:86272600-86277200 | Active TSS | Brain Hippocampus Middle | brain |
| 7 | chr7:86272600-86277200 | Active TSS | Brain Dorsolateral Prefrontal Cortex | brain |
| 8 | chr7:86272600-86277400 | Active TSS | Brain Angular Gyrus | brain |
| 9 | chr7:86272600-86277800 | Active TSS | Brain Cingulate Gyrus | brain |
| 10 | chr7:86272600-86278000 | Active TSS | Brain Anterior Caudate | brain |
| 11 | chr7:86272600-86278000 | Active TSS | Brain Inferior Temporal Lobe | brain |
| 12 | chr7:86272800-86274600 | Active TSS | H9 Cell Line | embryonic stem cell |
| 13 | chr7:86272800-86274600 | Flanking Bivalent TSS/Enh | Cortex derived primary cultured neurospheres | brain |
| 14 | chr7:86272800-86274600 | Flanking Bivalent TSS/Enh | Ganglion Eminence derived primary cultured neurospheres | brain |
| 15 | chr7:86272800-86274600 | Bivalent/Poised TSS | Stomach Smooth Muscle | stomach |
| 16 | chr7:86272800-86274800 | Bivalent/Poised TSS | ES-I3 Cell Line | embryonic stem cell |
| 17 | chr7:86272800-86274800 | Bivalent/Poised TSS | ES-WA7 Cell Line | embryonic stem cell |
| 18 | chr7:86272800-86274800 | Bivalent/Poised TSS | HUES48 Cell Line | embryonic stem cell |
| 19 | chr7:86272800-86274800 | Flanking Bivalent TSS/Enh | Fetal Adrenal Gland | Adrenal Gland |
| 20 | chr7:86272800-86275000 | Active TSS | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 21 | chr7:86272800-86275800 | Active TSS | Brain Substantia Nigra | brain |
| 22 | chr7:86273000-86274400 | Enhancers | Esophagus | oesophagus |
| 23 | chr7:86273000-86274600 | Flanking Bivalent TSS/Enh | Adipose Nuclei | Adipose |
| 24 | chr7:86273000-86274600 | Enhancers | Pancreas | Pancrea |
| 25 | chr7:86273000-86275000 | Bivalent Enhancer | Liver | Liver |
| 26 | chr7:86273000-86275400 | Bivalent/Poised TSS | HUES6 Cell Line | embryonic stem cell |
| 27 | chr7:86273200-86274400 | Bivalent/Poised TSS | Duodenum Mucosa | Duodenum |
| 28 | chr7:86273200-86274400 | Bivalent/Poised TSS | Rectal Smooth Muscle | rectum |
| 29 | chr7:86273200-86274400 | Enhancers | Spleen | Spleen |
| 30 | chr7:86273200-86274800 | Enhancers | Gastric | stomach |
| 31 | chr7:86273400-86274800 | Bivalent/Poised TSS | HUES64 Cell Line | embryonic stem cell |
| 32 | chr7:86273400-86274800 | Bivalent/Poised TSS | iPS DF 6.9 Cell Line | embryonic stem cell |
| 33 | chr7:86273400-86275400 | Bivalent/Poised TSS | H1 Cell Line | embryonic stem cell |
| 34 | chr7:86273400-86275600 | Bivalent/Poised TSS | iPS-18 Cell Line | embryonic stem cell |
| 35 | chr7:86273600-86274400 | Bivalent/Poised TSS | Colon Smooth Muscle | Colon |
| 36 | chr7:86273600-86274400 | Enhancers | Lung | lung |
| 37 | chr7:86273600-86274600 | Bivalent/Poised TSS | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 38 | chr7:86273600-86274800 | Bivalent Enhancer | Fetal Heart | heart |
| 39 | chr7:86273800-86274400 | Bivalent/Poised TSS | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 40 | chr7:86273800-86274400 | Flanking Bivalent TSS/Enh | Duodenum Smooth Muscle | Duodenum |
| 41 | chr7:86273800-86274400 | Bivalent Enhancer | Fetal Lung | lung |
| 42 | chr7:86273800-86274600 | Bivalent Enhancer | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 43 | chr7:86273800-86275200 | Bivalent/Poised TSS | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 44 | chr7:86274000-86274400 | Bivalent/Poised TSS | Brain Germinal Matrix | brain |
| 45 | chr7:86274000-86274400 | Flanking Bivalent TSS/Enh | Colonic Mucosa | Colon |
| 46 | chr7:86274000-86274400 | Bivalent Enhancer | Ovary | ovary |
| 47 | chr7:86274000-86274400 | Flanking Bivalent TSS/Enh | Skeletal Muscle Male | skeletal muscle |
| 48 | chr7:86274000-86274600 | Flanking Active TSS | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 49 | chr7:86274000-86274600 | Bivalent/Poised TSS | Fetal Brain Female | brain |
| 50 | chr7:86274000-86274600 | Bivalent Enhancer | Fetal Muscle Leg | muscle |
