Variant report

Variant rs56244723
Chromosome Location chr15:55549417-55549418
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:74 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:55490000-55562800 Weak transcription Ovary ovary
2 chr15:55514800-55560400 Weak transcription Spleen Spleen
3 chr15:55516000-55559600 Weak transcription Fetal Stomach stomach
4 chr15:55520800-55574800 Weak transcription Stomach Smooth Muscle stomach
5 chr15:55540600-55561200 Weak transcription Esophagus oesophagus
6 chr15:55542400-55581000 Weak transcription Fetal Intestine Small intestine
7 chr15:55543400-55550600 Weak transcription Fetal Kidney kidney
8 chr15:55543600-55559200 Weak transcription Hela-S3 cervix
9 chr15:55543800-55559400 Weak transcription Thymus Thymus
10 chr15:55544400-55558800 Weak transcription Right Ventricle heart
11 chr15:55544800-55557800 Weak transcription Pancreas Pancrea
12 chr15:55545200-55561000 Weak transcription Lung lung
13 chr15:55546200-55559200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
14 chr15:55546200-55559800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
15 chr15:55546200-55559800 Weak transcription Muscle Satellite Cultured Cells --
16 chr15:55547200-55549600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr15:55547200-55549600 Enhancers Small Intestine intestine
18 chr15:55547200-55550000 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
19 chr15:55547200-55551000 Genic enhancers K562 blood
20 chr15:55547200-55553800 Genic enhancers Foreskin Melanocyte Primary Cells skin03 Skin
21 chr15:55547400-55555000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
22 chr15:55547600-55549800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr15:55547600-55550000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr15:55547600-55550000 Enhancers Sigmoid Colon Sigmoid Colon
25 chr15:55547600-55559400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr15:55547800-55557400 Weak transcription NHDF-Ad bronchial
27 chr15:55547800-55558600 Weak transcription Fetal Muscle Leg muscle
28 chr15:55547800-55559400 Weak transcription Osteobl bone
29 chr15:55547800-55559600 Weak transcription Colon Smooth Muscle Colon
30 chr15:55547800-55571400 Weak transcription Aorta Aorta
31 chr15:55548000-55551200 Enhancers Primary Natural Killer cells fromperipheralblood blood
32 chr15:55548000-55551400 Weak transcription Psoas Muscle Psoas
33 chr15:55548000-55558800 Weak transcription Pancreatic Islets Pancreatic Islet
34 chr15:55548000-55558800 Weak transcription Fetal Lung lung
35 chr15:55548000-55559400 Weak transcription Duodenum Smooth Muscle Duodenum
36 chr15:55548200-55550800 Enhancers Primary B cells from cord blood blood
37 chr15:55548200-55551200 Enhancers Primary neutrophils fromperipheralblood blood
38 chr15:55548200-55551400 Enhancers Primary B cells from peripheral blood blood
39 chr15:55548200-55551400 Enhancers Primary T killer naive cells fromperipheralblood blood
40 chr15:55548400-55549600 Enhancers Liver Liver
41 chr15:55548400-55550000 Enhancers Primary T helper 17 cells PMA-I stimulated --
42 chr15:55548400-55550400 Enhancers Monocytes-CD14+_RO01746 blood
43 chr15:55548400-55550600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
44 chr15:55548400-55551000 Enhancers Primary T helper naive cells from peripheral blood blood
45 chr15:55548400-55551000 Enhancers Primary T killer memory cells from peripheral blood blood
46 chr15:55548400-55560200 Weak transcription Rectal Mucosa Donor 29 rectum
47 chr15:55548600-55551000 Enhancers Primary T helper cells PMA-I stimulated --
48 chr15:55548600-55551000 Enhancers Primary T helper cells fromperipheralblood blood
49 chr15:55548600-55551400 Enhancers Primary T cells fromperipheralblood blood
50 chr15:55548600-55555400 Weak transcription Primary T regulatory cells fromperipheralblood blood

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