Variant report

Variant rs56290934
Chromosome Location chr2:55254703-55254704
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:55203800-55258400 Weak transcription Esophagus oesophagus
2 chr2:55237600-55258600 Weak transcription Ovary ovary
3 chr2:55237600-55272600 Weak transcription Fetal Stomach stomach
4 chr2:55241000-55272400 Weak transcription Fetal Kidney kidney
5 chr2:55242400-55258000 Weak transcription Skeletal Muscle Male skeletal muscle
6 chr2:55243000-55262400 Weak transcription Hela-S3 cervix
7 chr2:55243800-55259800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr2:55245000-55256000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
9 chr2:55245600-55265600 Weak transcription Stomach Mucosa stomach
10 chr2:55246800-55259800 Weak transcription NH-A brain
11 chr2:55248200-55255200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
12 chr2:55248200-55255200 Weak transcription Left Ventricle heart
13 chr2:55248200-55258400 Weak transcription Lung lung
14 chr2:55248200-55259200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
15 chr2:55248600-55256400 Enhancers Primary T killer naive cells fromperipheralblood blood
16 chr2:55249000-55256200 Enhancers Primary T helper naive cells from peripheral blood blood
17 chr2:55249000-55256600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
18 chr2:55249000-55256600 Enhancers Primary T helper naive cells fromperipheralblood blood
19 chr2:55249000-55256600 Enhancers Primary T helper cells PMA-I stimulated --
20 chr2:55249000-55256600 Enhancers Primary T helper cells fromperipheralblood blood
21 chr2:55249200-55255000 Strong transcription Dnd41 blood
22 chr2:55249200-55256600 Enhancers Brain Angular Gyrus brain
23 chr2:55249400-55254800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
24 chr2:55249400-55254800 Genic enhancers Brain Anterior Caudate brain
25 chr2:55249400-55255200 Weak transcription Brain Germinal Matrix brain
26 chr2:55249400-55256400 Enhancers Adipose Nuclei Adipose
27 chr2:55249800-55255200 Enhancers Primary neutrophils fromperipheralblood blood
28 chr2:55249800-55255200 Weak transcription Cortex derived primary cultured neurospheres brain
29 chr2:55249800-55255800 Enhancers Monocytes-CD14+_RO01746 blood
30 chr2:55250000-55256000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
31 chr2:55250000-55256400 Enhancers Colon Smooth Muscle Colon
32 chr2:55250000-55260000 Weak transcription Gastric stomach
33 chr2:55250200-55255000 Weak transcription Fetal Brain Male brain
34 chr2:55250200-55256400 Enhancers Rectal Smooth Muscle rectum
35 chr2:55250400-55254800 Weak transcription Rectal Mucosa Donor 29 rectum
36 chr2:55250400-55255000 Genic enhancers Muscle Satellite Cultured Cells --
37 chr2:55250400-55271000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
38 chr2:55250400-55274000 Weak transcription Pancreas Pancrea
39 chr2:55250600-55258400 Weak transcription Spleen Spleen
40 chr2:55251200-55254800 Genic enhancers HMEC breast
41 chr2:55251200-55255400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr2:55251400-55254800 Genic enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr2:55251400-55254800 Genic enhancers NHDF-Ad bronchial
44 chr2:55251400-55258000 Weak transcription Fetal Heart heart
45 chr2:55251400-55259400 Weak transcription Primary T cells fromperipheralblood blood
46 chr2:55251600-55256200 Weak transcription H9 Cell Line embryonic stem cell
47 chr2:55251600-55256600 Enhancers Brain Cingulate Gyrus brain
48 chr2:55251800-55256000 Enhancers Primary T cells from cord blood blood
49 chr2:55251800-55256400 Enhancers Duodenum Smooth Muscle Duodenum
50 chr2:55252000-55255400 Enhancers Primary monocytes fromperipheralblood blood

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