Variant report

Variant rs73936805
Chromosome Location chr2:55237906-55237907
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:55203800-55258400 Weak transcription Esophagus oesophagus
2 chr2:55227600-55239000 Weak transcription Hela-S3 cervix
3 chr2:55231000-55238200 Active TSS Skeletal Muscle Female skeletal muscle
4 chr2:55232200-55244800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
5 chr2:55233200-55240400 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
6 chr2:55234800-55244800 Weak transcription H9 Cell Line embryonic stem cell
7 chr2:55234800-55246000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
8 chr2:55235400-55238000 Active TSS Breast Myoepithelial Primary Cells Breast
9 chr2:55235600-55240600 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
10 chr2:55236000-55238400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
11 chr2:55236200-55238000 Flanking Active TSS Primary T cells from cord blood blood
12 chr2:55236200-55239600 Enhancers Primary neutrophils fromperipheralblood blood
13 chr2:55236400-55238000 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
14 chr2:55236400-55238800 Flanking Active TSS Monocytes-CD14+_RO01746 blood
15 chr2:55236600-55238000 Flanking Active TSS Primary hematopoietic stem cells blood
16 chr2:55236600-55238000 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
17 chr2:55236600-55238000 Flanking Active TSS Adipose Nuclei Adipose
18 chr2:55236600-55238000 Flanking Active TSS Duodenum Smooth Muscle Duodenum
19 chr2:55236600-55238200 Enhancers Brain Germinal Matrix brain
20 chr2:55236600-55241400 Enhancers HUES48 Cell Line embryonic stem cell
21 chr2:55236800-55238000 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
22 chr2:55236800-55238000 Flanking Active TSS A549 lung
23 chr2:55236800-55238000 Flanking Active TSS HMEC breast
24 chr2:55236800-55238600 Enhancers HepG2 liver
25 chr2:55236800-55240800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
26 chr2:55236800-55243400 Enhancers HUES64 Cell Line embryonic stem cell
27 chr2:55237000-55238000 Enhancers Fetal Brain Female brain
28 chr2:55237000-55243600 Enhancers ES-I3 Cell Line embryonic stem cell
29 chr2:55237200-55238400 Flanking Active TSS Liver Liver
30 chr2:55237200-55238400 Enhancers Sigmoid Colon Sigmoid Colon
31 chr2:55237200-55239600 Enhancers H1 Cell Line embryonic stem cell
32 chr2:55237200-55241600 Enhancers iPS-15b Cell Line embryonic stem cell
33 chr2:55237400-55238000 Flanking Active TSS Rectal Mucosa Donor 29 rectum
34 chr2:55237400-55238200 Weak transcription Placenta Placenta
35 chr2:55237400-55238200 Weak transcription Stomach Mucosa stomach
36 chr2:55237400-55238400 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
37 chr2:55237400-55239400 Enhancers Primary B cells from peripheral blood blood
38 chr2:55237400-55240800 Enhancers Fetal Adrenal Gland Adrenal Gland
39 chr2:55237400-55242800 Enhancers HSMMtube muscle
40 chr2:55237600-55238000 Flanking Active TSS Pancreatic Islets Pancreatic Islet
41 chr2:55237600-55238000 Enhancers Stomach Smooth Muscle stomach
42 chr2:55237600-55238200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
43 chr2:55237600-55238200 Weak transcription Fetal Intestine Small intestine
44 chr2:55237600-55238200 Weak transcription Small Intestine intestine
45 chr2:55237600-55238400 Enhancers Primary T helper 17 cells PMA-I stimulated --
46 chr2:55237600-55238400 Enhancers Primary mononuclear cells fromperipheralblood Blood
47 chr2:55237600-55238400 Enhancers Psoas Muscle Psoas
48 chr2:55237600-55238400 Enhancers Right Atrium heart
49 chr2:55237600-55238600 Enhancers Fetal Kidney kidney
50 chr2:55237600-55238600 Weak transcription HUVEC blood vessel

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