Variant report

Variant	rs56325087
Chromosome Location	chr14:65596284-65596285
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs2296314	0.81[ASN][1000 genomes]
rs2296320	0.81[ASN][1000 genomes]
rs34601568	0.95[ASN][1000 genomes]
rs3783716	0.90[ASN][1000 genomes]
rs3783717	0.90[ASN][1000 genomes]
rs3783718	0.90[ASN][1000 genomes]
rs3783719	0.90[ASN][1000 genomes]
rs3825641	0.95[ASN][1000 genomes]
rs55884327	0.84[EUR][1000 genomes]
rs55955501	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs7142375	0.95[ASN][1000 genomes]
rs7155468	0.90[ASN][1000 genomes]
rs72728236	0.90[ASN][1000 genomes]
rs73272630	0.95[ASN][1000 genomes]
rs9944027	0.95[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832816	chr14:65473244-65644645	Weak transcription Strong transcription Enhancers Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	19 gene(s)	inside rSNPs	diseases
2	esv1833060	chr14:65594460-65607642	Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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