Variant report

Variant rs56343029
Chromosome Location chr19:52463437-52463438
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:26 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:52449600-52468000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
2 chr19:52457400-52464600 Weak transcription Skeletal Muscle Male skeletal muscle
3 chr19:52457600-52467600 Weak transcription H1 Cell Line embryonic stem cell
4 chr19:52460000-52464400 Weak transcription Stomach Smooth Muscle stomach
5 chr19:52460200-52464800 Weak transcription Brain Germinal Matrix brain
6 chr19:52460400-52464800 Weak transcription Cortex derived primary cultured neurospheres brain
7 chr19:52460400-52465800 Enhancers HepG2 liver
8 chr19:52461800-52465600 Enhancers Fetal Adrenal Gland Adrenal Gland
9 chr19:52461800-52466800 Weak transcription Fetal Kidney kidney
10 chr19:52462200-52463800 Weak transcription Duodenum Smooth Muscle Duodenum
11 chr19:52462200-52464600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
12 chr19:52462800-52464800 Weak transcription Dnd41 blood
13 chr19:52462800-52466400 Weak transcription Brain Angular Gyrus brain
14 chr19:52463000-52464000 Enhancers Fetal Lung lung
15 chr19:52463000-52464800 Enhancers K562 blood
16 chr19:52463200-52465400 Weak transcription Fetal Brain Female brain
17 chr19:52463400-52464200 Enhancers Placenta Placenta
18 chr19:52463400-52464400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
19 chr19:52463400-52465000 Weak transcription Brain Anterior Caudate brain
20 chr19:52463400-52465200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
21 chr19:52463400-52465200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
22 chr19:52463400-52465400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
23 chr19:52463400-52465600 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
24 chr19:52463400-52488200 ZNF genes & repeats Adipose Nuclei Adipose
25 chr19:52463400-52488800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
26 chr19:52463400-52489000 ZNF genes & repeats Primary T helper cells fromperipheralblood blood

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