Variant report

Variant rs7260641
Chromosome Location chr19:52484368-52484369
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:52463400-52488200 ZNF genes & repeats Adipose Nuclei Adipose
2 chr19:52463400-52488800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
3 chr19:52463400-52489000 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
4 chr19:52463800-52488200 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
5 chr19:52464400-52488200 ZNF genes & repeats Rectal Mucosa Donor 29 rectum
6 chr19:52464400-52488400 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
7 chr19:52464400-52488800 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
8 chr19:52464600-52488000 ZNF genes & repeats Duodenum Mucosa Duodenum
9 chr19:52464600-52488800 ZNF genes & repeats Liver Liver
10 chr19:52465000-52488800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
11 chr19:52465200-52485000 ZNF genes & repeats Ovary ovary
12 chr19:52465200-52485200 ZNF genes & repeats Fetal Lung lung
13 chr19:52465200-52489000 ZNF genes & repeats Primary hematopoietic stem cells blood
14 chr19:52465200-52489000 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
15 chr19:52465200-52489000 ZNF genes & repeats Primary T regulatory cells fromperipheralblood blood
16 chr19:52465400-52488600 ZNF genes & repeats Primary T cells from cord blood blood
17 chr19:52465800-52488200 ZNF genes & repeats Primary T helper cells PMA-I stimulated --
18 chr19:52466400-52484800 ZNF genes & repeats Pancreatic Islets Pancreatic Islet
19 chr19:52466600-52485200 ZNF genes & repeats Primary T helper naive cells fromperipheralblood blood
20 chr19:52466600-52489000 ZNF genes & repeats Primary B cells from peripheral blood blood
21 chr19:52467200-52485000 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
22 chr19:52467200-52485200 ZNF genes & repeats Fetal Brain Female brain
23 chr19:52467400-52484800 ZNF genes & repeats H1 Derived Mesenchymal Stem Cells ES cell derived
24 chr19:52467400-52488200 ZNF genes & repeats Primary T cells effector/memory enriched fromperipheralblood blood
25 chr19:52467600-52485400 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
26 chr19:52467800-52484800 ZNF genes & repeats Colonic Mucosa Colon
27 chr19:52467800-52485000 ZNF genes & repeats Primary Natural Killer cells fromperipheralblood blood
28 chr19:52468000-52484800 ZNF genes & repeats Aorta Aorta
29 chr19:52468000-52484800 ZNF genes & repeats Lung lung
30 chr19:52468400-52488400 ZNF genes & repeats Dnd41 blood
31 chr19:52475400-52488800 Weak transcription Hela-S3 cervix
32 chr19:52477200-52489400 Weak transcription ES-WA7 Cell Line embryonic stem cell
33 chr19:52477600-52488800 Weak transcription Muscle Satellite Cultured Cells --
34 chr19:52478000-52488600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
35 chr19:52478000-52488600 Weak transcription HSMMtube muscle
36 chr19:52478200-52488800 Weak transcription Right Ventricle heart
37 chr19:52478600-52488400 Weak transcription NHDF-Ad bronchial
38 chr19:52479600-52484800 ZNF genes & repeats Colon Smooth Muscle Colon
39 chr19:52479600-52489000 ZNF genes & repeats Primary B cells from cord blood blood
40 chr19:52480000-52484800 ZNF genes & repeats Sigmoid Colon Sigmoid Colon
41 chr19:52480600-52488200 ZNF genes & repeats Primary T killer naive cells fromperipheralblood blood
42 chr19:52481000-52488800 Weak transcription Fetal Heart heart
43 chr19:52481400-52485000 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
44 chr19:52481400-52485000 ZNF genes & repeats Brain Germinal Matrix brain
45 chr19:52481600-52485000 ZNF genes & repeats Primary mononuclear cells fromperipheralblood Blood
46 chr19:52481800-52485200 ZNF genes & repeats GM12878-XiMat blood
47 chr19:52482000-52485000 ZNF genes & repeats Primary monocytes fromperipheralblood blood
48 chr19:52482200-52484800 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
49 chr19:52482200-52484800 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
50 chr19:52482200-52484800 ZNF genes & repeats Spleen Spleen

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