Variant report

Variant rs11882580
Chromosome Location chr19:52491858-52491859
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:23 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:52490200-52493000 ZNF genes & repeats Primary T helper cells PMA-I stimulated --
2 chr19:52490200-52494000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
3 chr19:52490200-52494200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr19:52490200-52496000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr19:52490400-52509800 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
6 chr19:52490600-52492000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
7 chr19:52490600-52493800 Weak transcription Brain Anterior Caudate brain
8 chr19:52490600-52494200 Weak transcription Stomach Smooth Muscle stomach
9 chr19:52490600-52495400 Weak transcription iPS-15b Cell Line embryonic stem cell
10 chr19:52490600-52495400 Weak transcription Brain Germinal Matrix brain
11 chr19:52490600-52495600 Weak transcription Right Ventricle heart
12 chr19:52490600-52495800 Weak transcription Fetal Heart heart
13 chr19:52490600-52496000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
14 chr19:52490600-52496000 Weak transcription Fetal Kidney kidney
15 chr19:52490600-52496000 Weak transcription Placenta Amnion Placenta Amnion
16 chr19:52490600-52496200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
17 chr19:52491000-52494800 ZNF genes & repeats Liver Liver
18 chr19:52491000-52507600 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
19 chr19:52491200-52492000 Weak transcription Duodenum Mucosa Duodenum
20 chr19:52491600-52492600 ZNF genes & repeats Left Ventricle heart
21 chr19:52491800-52493000 ZNF genes & repeats Skeletal Muscle Male skeletal muscle
22 chr19:52491800-52507600 ZNF genes & repeats Adipose Nuclei Adipose
23 chr19:52491800-52508000 ZNF genes & repeats Duodenum Smooth Muscle Duodenum

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