Variant report

Variant rs6509613
Chromosome Location chr19:52529074-52529075
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:52514000-52530400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
2 chr19:52515200-52530800 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr19:52515400-52530800 ZNF genes & repeats Primary B cells from cord blood blood
4 chr19:52515400-52546400 ZNF genes & repeats Liver Liver
5 chr19:52515600-52529400 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
6 chr19:52516000-52529400 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
7 chr19:52517200-52529200 ZNF genes & repeats Primary T cells from cord blood blood
8 chr19:52517400-52529400 Strong transcription iPS-18 Cell Line embryonic stem cell
9 chr19:52517400-52529400 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
10 chr19:52517400-52529600 ZNF genes & repeats Primary T killer naive cells fromperipheralblood blood
11 chr19:52517400-52530200 ZNF genes & repeats Ovary ovary
12 chr19:52517400-52530600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
13 chr19:52517400-52530800 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
14 chr19:52517600-52530200 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
15 chr19:52517600-52530400 ZNF genes & repeats Primary hematopoietic stem cells blood
16 chr19:52517600-52530800 ZNF genes & repeats GM12878-XiMat blood
17 chr19:52517800-52529400 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
18 chr19:52517800-52530200 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin01 Skin
19 chr19:52517800-52530600 ZNF genes & repeats Fetal Muscle Leg muscle
20 chr19:52518200-52529200 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
21 chr19:52518400-52529400 ZNF genes & repeats Primary T helper cells PMA-I stimulated --
22 chr19:52518400-52529400 ZNF genes & repeats A549 lung
23 chr19:52518600-52530600 ZNF genes & repeats Rectal Mucosa Donor 31 rectum
24 chr19:52518800-52529600 ZNF genes & repeats Duodenum Mucosa Duodenum
25 chr19:52518800-52529600 ZNF genes & repeats Fetal Lung lung
26 chr19:52518800-52529800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr19:52518800-52530600 ZNF genes & repeats Primary T regulatory cells fromperipheralblood blood
28 chr19:52519000-52529200 ZNF genes & repeats Primary monocytes fromperipheralblood blood
29 chr19:52519000-52529400 ZNF genes & repeats Primary Natural Killer cells fromperipheralblood blood
30 chr19:52519000-52529400 ZNF genes & repeats Small Intestine intestine
31 chr19:52519000-52529600 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
32 chr19:52519000-52530200 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
33 chr19:52519000-52530200 ZNF genes & repeats Aorta Aorta
34 chr19:52519000-52530800 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
35 chr19:52519000-52531000 ZNF genes & repeats Fetal Intestine Large intestine
36 chr19:52519200-52529600 Strong transcription Placenta Amnion Placenta Amnion
37 chr19:52519200-52530200 ZNF genes & repeats Primary T cells fromperipheralblood blood
38 chr19:52519200-52530200 ZNF genes & repeats Primary mononuclear cells fromperipheralblood Blood
39 chr19:52519200-52532200 ZNF genes & repeats Lung lung
40 chr19:52519400-52529200 ZNF genes & repeats Dnd41 blood
41 chr19:52519400-52529400 ZNF genes & repeats Thymus Thymus
42 chr19:52520400-52530400 ZNF genes & repeats Fetal Stomach stomach
43 chr19:52520600-52529400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
44 chr19:52520600-52530800 ZNF genes & repeats Fetal Intestine Small intestine
45 chr19:52521600-52529200 Strong transcription Osteobl bone
46 chr19:52521800-52529400 Strong transcription Skeletal Muscle Male skeletal muscle
47 chr19:52522400-52529400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr19:52523200-52529200 Strong transcription Right Ventricle heart
49 chr19:52523200-52529600 ZNF genes & repeats Fetal Brain Female brain
50 chr19:52523200-52530000 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain

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