The 2.0 version of rSNPBase

Variant report

Variant rs56376893
Chromosome Location chr7:129502514-129502515
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:129475000-129534800 Weak transcription Colonic Mucosa Colon
2 chr7:129479400-129543600 Weak transcription Thymus Thymus
3 chr7:129481400-129510000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
4 chr7:129484200-129503000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr7:129485400-129503800 Weak transcription Lung lung
6 chr7:129486400-129505400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr7:129491600-129510000 Weak transcription Fetal Intestine Large intestine
8 chr7:129492000-129509200 Weak transcription Fetal Intestine Small intestine
9 chr7:129493800-129510400 Weak transcription Brain Germinal Matrix brain
10 chr7:129494400-129518800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
11 chr7:129495400-129510400 Weak transcription Primary T regulatory cells fromperipheralblood blood
12 chr7:129495600-129517000 Weak transcription Fetal Lung lung
13 chr7:129496200-129505600 Weak transcription Fetal Muscle Trunk muscle
14 chr7:129496200-129509400 Weak transcription Primary T cells fromperipheralblood blood
15 chr7:129496400-129520400 Weak transcription Fetal Brain Female brain
16 chr7:129496800-129502600 Weak transcription Fetal Stomach stomach
17 chr7:129496800-129504000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
18 chr7:129496800-129509600 Weak transcription HepG2 liver
19 chr7:129496800-129510200 Weak transcription Fetal Thymus thymus
20 chr7:129497000-129503200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
21 chr7:129497000-129503800 Weak transcription Muscle Satellite Cultured Cells --
22 chr7:129497000-129513400 Weak transcription Rectal Mucosa Donor 29 rectum
23 chr7:129497000-129515800 Weak transcription Placenta Placenta
24 chr7:129497000-129536800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
25 chr7:129497200-129511200 Weak transcription Cortex derived primary cultured neurospheres brain
26 chr7:129497400-129503000 Weak transcription Hela-S3 cervix
27 chr7:129497800-129503000 Enhancers Primary hematopoietic stem cells blood
28 chr7:129497800-129505000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
29 chr7:129498000-129503800 Weak transcription HSMM muscle
30 chr7:129498200-129507200 Enhancers Adipose Nuclei Adipose
31 chr7:129498400-129503200 Enhancers Primary T killer naive cells fromperipheralblood blood
32 chr7:129498400-129503600 Enhancers Primary T helper cells PMA-I stimulated --
33 chr7:129498400-129506000 Enhancers Skeletal Muscle Female skeletal muscle
34 chr7:129498600-129504400 Enhancers K562 blood
35 chr7:129498600-129506800 Enhancers Skeletal Muscle Male skeletal muscle
36 chr7:129499200-129504800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
37 chr7:129499200-129517200 Weak transcription Rectal Mucosa Donor 31 rectum
38 chr7:129499400-129502800 Enhancers Fetal Heart heart
39 chr7:129499400-129502800 Weak transcription Pancreatic Islets Pancreatic Islet
40 chr7:129499400-129503000 Enhancers Primary hematopoietic stem cells short term culture blood
41 chr7:129499400-129503400 Enhancers Primary T helper cells fromperipheralblood blood
42 chr7:129499600-129506000 Enhancers Pancreas Pancrea
43 chr7:129499800-129502800 Enhancers Stomach Smooth Muscle stomach
44 chr7:129499800-129503000 Weak transcription Osteobl bone
45 chr7:129499800-129504200 Enhancers GM12878-XiMat blood
46 chr7:129499800-129509600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
47 chr7:129500000-129502600 Weak transcription Sigmoid Colon Sigmoid Colon
48 chr7:129500000-129503000 Weak transcription NH-A brain
49 chr7:129500000-129503200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
50 chr7:129500000-129503400 Enhancers Primary neutrophils fromperipheralblood blood

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Last update: Aug 31, 2015