Variant report

Variant	rs56378855
Chromosome Location	chr1:211150846-211150847
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs55747858	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56044218	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56998447	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61262114	1.00[AMR][1000 genomes]
rs74156870	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74156874	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74156876	0.85[AFR][1000 genomes]
rs74156877	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv524740	chr1:211143108-211155614	Enhancers Strong transcription Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:211123000-211152000	Weak transcription	HSMM	muscle

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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