Variant report

Variant	rs564443
Chromosome Location	chr10:89807917-89807918
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs495149	1.00[CEU][hapmap];0.97[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs507795	1.00[CEU][hapmap];0.87[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs572474	0.91[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs575957	0.91[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs621891	1.00[CEU][hapmap];1.00[CHB][hapmap];0.84[AFR][1000 genomes];0.97[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs664317	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs666579	0.93[AFR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs692788	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs692942	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs806676	0.91[AMR][1000 genomes];0.91[EUR][1000 genomes]

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:89801600-89808400	Enhancers	Primary monocytes fromperipheralblood	blood
2	chr10:89802600-89822200	Weak transcription	Aorta	Aorta
3	chr10:89803400-89822000	Weak transcription	Psoas Muscle	Psoas
4	chr10:89805000-89808400	Enhancers	Primary hematopoietic stem cells short term culture	blood
5	chr10:89806400-89810800	Enhancers	Dnd41	blood
6	chr10:89806800-89808400	Enhancers	Monocytes-CD14+_RO01746	blood
7	chr10:89806800-89809400	Weak transcription	Lung	lung
8	chr10:89807800-89808000	Enhancers	Breast Myoepithelial Primary Cells	Breast
9	chr10:89807800-89808000	Enhancers	Skeletal Muscle Female	skeletal muscle
10	chr10:89807800-89808400	Enhancers	ES-I3 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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