Variant report

Variant	rs806676
Chromosome Location	chr10:89787009-89787010
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs1556741	0.80[ASN][1000 genomes]
rs495149	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs507795	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs564443	0.91[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs572474	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs575957	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs621891	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs664317	0.91[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs666579	0.87[EUR][1000 genomes]
rs692788	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs692942	0.91[AMR][1000 genomes];0.86[EUR][1000 genomes]

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:89783200-89787200	Weak transcription	Osteobl	bone
2	chr10:89783200-89792200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
3	chr10:89784800-89789000	Enhancers	Primary neutrophils fromperipheralblood	blood
4	chr10:89786000-89787200	Weak transcription	Adipose Nuclei	Adipose
5	chr10:89786000-89787800	Weak transcription	Fetal Intestine Small	intestine
6	chr10:89786000-89789000	Enhancers	Primary monocytes fromperipheralblood	blood
7	chr10:89786200-89787400	Weak transcription	Rectal Mucosa Donor 31	rectum
8	chr10:89786400-89787400	Weak transcription	Fetal Intestine Large	intestine
9	chr10:89786400-89787600	Enhancers	Monocytes-CD14+_RO01746	blood
10	chr10:89786800-89788400	Enhancers	Primary B cells from cord blood	blood
11	chr10:89786800-89788600	Enhancers	Primary B cells from peripheral blood	blood
12	chr10:89787000-89787200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
13	chr10:89787000-89787200	Enhancers	GM12878-XiMat	blood
14	chr10:89787000-89787600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
15	chr10:89787000-89787600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
16	chr10:89787000-89788800	Enhancers	Primary hematopoietic stem cells	blood
17	chr10:89787000-89789200	Enhancers	Primary T cells from cord blood	blood
18	chr10:89787000-89789200	Enhancers	Primary hematopoietic stem cells short term culture	blood
19	chr10:89787000-89789400	Enhancers	Dnd41	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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