The 2.0 version of rSNPBase

Variant report

Variant rs56677212
Chromosome Location chr2:64229688-64229689
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:64154800-64242600 Weak transcription Aorta Aorta
2 chr2:64185800-64245000 Weak transcription H9 Cell Line embryonic stem cell
3 chr2:64194000-64243200 Weak transcription NHLF lung
4 chr2:64202800-64232400 Weak transcription Stomach Smooth Muscle stomach
5 chr2:64209400-64244800 Weak transcription HSMM muscle
6 chr2:64210200-64243000 Weak transcription Muscle Satellite Cultured Cells --
7 chr2:64213800-64244600 Weak transcription HUVEC blood vessel
8 chr2:64219200-64237000 Weak transcription Placenta Placenta
9 chr2:64219400-64238400 Weak transcription Gastric stomach
10 chr2:64222400-64230800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
11 chr2:64222400-64242600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
12 chr2:64222400-64243000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
13 chr2:64223600-64235600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
14 chr2:64224800-64232600 Weak transcription A549 lung
15 chr2:64224800-64233000 Weak transcription Primary T regulatory cells fromperipheralblood blood
16 chr2:64225400-64242200 Weak transcription Primary T helper naive cells fromperipheralblood blood
17 chr2:64225800-64230400 Weak transcription iPS-15b Cell Line embryonic stem cell
18 chr2:64225800-64237000 Weak transcription Placenta Amnion Placenta Amnion
19 chr2:64225800-64242600 Weak transcription Fetal Kidney kidney
20 chr2:64226000-64243000 Weak transcription Rectal Mucosa Donor 31 rectum
21 chr2:64226000-64245000 Weak transcription Primary B cells from peripheral blood blood
22 chr2:64226200-64231400 Weak transcription Primary neutrophils fromperipheralblood blood
23 chr2:64226200-64245000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
24 chr2:64226200-64245000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
25 chr2:64226600-64242400 Weak transcription Primary B cells from cord blood blood
26 chr2:64226600-64242400 Weak transcription Duodenum Smooth Muscle Duodenum
27 chr2:64226800-64242600 Weak transcription Small Intestine intestine
28 chr2:64227000-64244600 Weak transcription Fetal Brain Female brain
29 chr2:64227200-64242000 Weak transcription Primary hematopoietic stem cells blood
30 chr2:64227200-64245400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
31 chr2:64227400-64235600 Weak transcription Fetal Thymus thymus
32 chr2:64227600-64230000 Genic enhancers HepG2 liver
33 chr2:64227800-64232600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
34 chr2:64228000-64230200 Weak transcription Colon Smooth Muscle Colon
35 chr2:64228200-64239800 Weak transcription Adipose Nuclei Adipose
36 chr2:64228200-64243800 Weak transcription Fetal Muscle Leg muscle
37 chr2:64228400-64232000 Weak transcription Brain Hippocampus Middle brain
38 chr2:64228600-64242600 Weak transcription Fetal Adrenal Gland Adrenal Gland
39 chr2:64228600-64243800 Weak transcription Primary T cells fromperipheralblood blood
40 chr2:64228800-64230000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr2:64228800-64230200 Enhancers Brain Substantia Nigra brain
42 chr2:64228800-64231000 Weak transcription Fetal Intestine Large intestine
43 chr2:64228800-64232600 Weak transcription Primary monocytes fromperipheralblood blood
44 chr2:64228800-64239200 Weak transcription Fetal Lung lung
45 chr2:64228800-64242600 Weak transcription Dnd41 blood
46 chr2:64229000-64242000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
47 chr2:64229000-64244800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
48 chr2:64229000-64245000 Weak transcription Sigmoid Colon Sigmoid Colon
49 chr2:64229200-64231400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr2:64229200-64232800 Weak transcription Duodenum Mucosa Duodenum

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Last update: Aug 31, 2015