The 2.0 version of rSNPBase

Variant report

Variant rs56685652
Chromosome Location chr1:178973368-178973369
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:178971600-178973600 Enhancers Stomach Mucosa stomach
2 chr1:178971600-178973800 Enhancers Primary B cells from peripheral blood blood
3 chr1:178971600-178974600 Enhancers Primary Natural Killer cells fromperipheralblood blood
4 chr1:178971800-178973600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
5 chr1:178971800-178973600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
6 chr1:178971800-178973600 Enhancers Primary T helper cells PMA-I stimulated --
7 chr1:178971800-178973600 Enhancers Primary T helper 17 cells PMA-I stimulated --
8 chr1:178971800-178973600 Enhancers Primary T killer naive cells fromperipheralblood blood
9 chr1:178971800-178973600 Enhancers Fetal Intestine Large intestine
10 chr1:178971800-178973800 Enhancers Primary T helper naive cells from peripheral blood blood
11 chr1:178972000-178973600 Enhancers Primary T helper naive cells fromperipheralblood blood
12 chr1:178972000-178973600 Enhancers Primary T helper cells fromperipheralblood blood
13 chr1:178972000-178973800 Enhancers Primary T cells from cord blood blood
14 chr1:178972000-178974200 Enhancers Primary T killer memory cells from peripheral blood blood
15 chr1:178972200-178973400 Enhancers iPS-15b Cell Line embryonic stem cell
16 chr1:178972200-178973400 Weak transcription Duodenum Smooth Muscle Duodenum
17 chr1:178972200-178973400 Enhancers Fetal Intestine Small intestine
18 chr1:178972200-178973400 Enhancers Rectal Mucosa Donor 31 rectum
19 chr1:178972200-178975200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
20 chr1:178972400-178973400 Enhancers Rectal Mucosa Donor 29 rectum
21 chr1:178972400-178974600 Enhancers Primary T cells fromperipheralblood blood
22 chr1:178972400-178976600 Weak transcription A549 lung
23 chr1:178972400-178976600 Weak transcription Osteobl bone
24 chr1:178972400-178977800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr1:178972400-178986000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr1:178972600-178974200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
27 chr1:178972600-178976400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
28 chr1:178972600-178977800 Weak transcription Stomach Smooth Muscle stomach
29 chr1:178972600-178978000 Weak transcription Adipose Nuclei Adipose
30 chr1:178972600-178981200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr1:178972800-178973600 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
32 chr1:178972800-178973800 Enhancers HepG2 liver
33 chr1:178972800-178978000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr1:178973000-178973600 Enhancers K562 blood
35 chr1:178973000-178976600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
36 chr1:178973200-178977800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
37 chr1:178973200-178979600 Weak transcription Sigmoid Colon Sigmoid Colon

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015