The 2.0 version of rSNPBase

Variant report

Variant rs10159048
Chromosome Location chr1:179066899-179066900
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:179053000-179072200 Strong transcription Primary T cells from cord blood blood
2 chr1:179053200-179067600 Strong transcription Primary hematopoietic stem cells short term culture blood
3 chr1:179053200-179071000 Strong transcription NHEK skin
4 chr1:179053200-179096000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
5 chr1:179053400-179067400 Strong transcription Fetal Intestine Small intestine
6 chr1:179053800-179067200 Strong transcription Thymus Thymus
7 chr1:179053800-179069000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
8 chr1:179053800-179074600 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr1:179054000-179067600 Strong transcription Fetal Intestine Large intestine
10 chr1:179054000-179071000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
11 chr1:179054000-179074800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr1:179054000-179077200 Weak transcription Primary T helper naive cells from peripheral blood blood
13 chr1:179054000-179079400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
14 chr1:179054400-179067200 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
15 chr1:179054400-179067800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
16 chr1:179054600-179067200 Strong transcription Rectal Mucosa Donor 31 rectum
17 chr1:179054800-179067200 Strong transcription Cortex derived primary cultured neurospheres brain
18 chr1:179054800-179067600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr1:179054800-179067800 Strong transcription Brain Germinal Matrix brain
20 chr1:179054800-179072200 Strong transcription Breast Myoepithelial Primary Cells Breast
21 chr1:179056400-179067400 Strong transcription Fetal Thymus thymus
22 chr1:179056600-179067800 Strong transcription Duodenum Mucosa Duodenum
23 chr1:179056600-179068000 Strong transcription Dnd41 blood
24 chr1:179057000-179067800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr1:179057200-179076800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
26 chr1:179057400-179068800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
27 chr1:179057600-179067200 Strong transcription HMEC breast
28 chr1:179058000-179067400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
29 chr1:179059200-179096400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
30 chr1:179059400-179067000 Strong transcription Brain Cingulate Gyrus brain
31 chr1:179059400-179067800 Strong transcription iPS-20b Cell Line embryonic stem cell
32 chr1:179059400-179090400 Strong transcription HUVEC blood vessel
33 chr1:179059600-179067400 Strong transcription K562 blood
34 chr1:179059600-179067800 Strong transcription HUES48 Cell Line embryonic stem cell
35 chr1:179059600-179067800 Strong transcription Brain Hippocampus Middle brain
36 chr1:179059800-179068000 Strong transcription HUES6 Cell Line embryonic stem cell
37 chr1:179060000-179068000 Strong transcription Primary B cells from peripheral blood blood
38 chr1:179061000-179067200 Strong transcription Brain Anterior Caudate brain
39 chr1:179061200-179067000 Strong transcription Fetal Muscle Trunk muscle
40 chr1:179061200-179068800 Strong transcription Hela-S3 cervix
41 chr1:179061400-179067000 Strong transcription Stomach Smooth Muscle stomach
42 chr1:179061400-179067800 Strong transcription Monocytes-CD14+_RO01746 blood
43 chr1:179061400-179068000 Strong transcription Brain Inferior Temporal Lobe brain
44 chr1:179061400-179071000 Strong transcription Fetal Muscle Leg muscle
45 chr1:179061400-179071600 Weak transcription Fetal Heart heart
46 chr1:179061400-179090400 Strong transcription HSMM muscle
47 chr1:179061600-179067400 Strong transcription Primary monocytes fromperipheralblood blood
48 chr1:179061600-179067400 Strong transcription Fetal Stomach stomach
49 chr1:179061600-179068000 Strong transcription Adipose Nuclei Adipose
50 chr1:179061600-179068000 Strong transcription A549 lung

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Last update: Aug 31, 2015