The 2.0 version of rSNPBase

Variant report

Variant rs56759930
Chromosome Location chr12:9109137-9109138
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:9103000-9109400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr12:9103400-9112000 Weak transcription Pancreas Pancrea
3 chr12:9103400-9116400 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr12:9103600-9110400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
5 chr12:9103600-9114000 Weak transcription Fetal Kidney kidney
6 chr12:9103600-9114200 Weak transcription Aorta Aorta
7 chr12:9103600-9114400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
8 chr12:9103600-9114600 Weak transcription Duodenum Smooth Muscle Duodenum
9 chr12:9104000-9110400 Weak transcription A549 lung
10 chr12:9104000-9111000 Weak transcription Stomach Smooth Muscle stomach
11 chr12:9104000-9113200 Weak transcription HepG2 liver
12 chr12:9104000-9114400 Weak transcription Psoas Muscle Psoas
13 chr12:9104400-9111200 Weak transcription Monocytes-CD14+_RO01746 blood
14 chr12:9104600-9110400 Enhancers Primary Natural Killer cells fromperipheralblood blood
15 chr12:9104600-9113800 Enhancers Primary T killer naive cells fromperipheralblood blood
16 chr12:9104800-9109600 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
17 chr12:9105000-9113600 Weak transcription Primary B cells from peripheral blood blood
18 chr12:9105000-9113800 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
19 chr12:9106600-9109400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
20 chr12:9106600-9116000 Weak transcription Left Ventricle heart
21 chr12:9106800-9109400 Enhancers Primary T regulatory cells fromperipheralblood blood
22 chr12:9106800-9110600 Enhancers Primary T helper 17 cells PMA-I stimulated --
23 chr12:9106800-9112200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
24 chr12:9106800-9114400 Enhancers Primary T cells fromperipheralblood blood
25 chr12:9106800-9114600 Enhancers Primary T helper cells fromperipheralblood blood
26 chr12:9107000-9110200 Weak transcription Brain Hippocampus Middle brain
27 chr12:9107000-9111200 Enhancers Primary T helper cells PMA-I stimulated --
28 chr12:9107200-9112800 Enhancers Primary T cells from cord blood blood
29 chr12:9107200-9112800 Enhancers Primary T helper naive cells from peripheral blood blood
30 chr12:9107400-9112600 Enhancers Primary T helper naive cells fromperipheralblood blood
31 chr12:9107400-9112600 Enhancers Primary T killer memory cells from peripheral blood blood
32 chr12:9107400-9112800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
33 chr12:9108000-9109600 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
34 chr12:9108200-9109600 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
35 chr12:9108200-9110000 ZNF genes & repeats Brain Germinal Matrix brain
36 chr12:9108400-9109200 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
37 chr12:9108400-9109400 ZNF genes & repeats Fetal Thymus thymus
38 chr12:9108600-9109800 Enhancers HMEC breast
39 chr12:9108600-9115200 Weak transcription Primary hematopoietic stem cells blood
40 chr12:9108800-9109800 Weak transcription iPS-15b Cell Line embryonic stem cell
41 chr12:9108800-9109800 Enhancers Breast Myoepithelial Primary Cells Breast
42 chr12:9109000-9109200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
43 chr12:9109000-9109800 Weak transcription Thymus Thymus
44 chr12:9109000-9110400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
45 chr12:9109000-9111000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
46 chr12:9109000-9111400 Weak transcription Fetal Muscle Leg muscle
47 chr12:9109000-9113400 Weak transcription Right Ventricle heart
48 chr12:9109000-9114600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
49 chr12:9109000-9115600 Weak transcription Skeletal Muscle Male skeletal muscle
50 chr12:9109000-9121600 Weak transcription Skeletal Muscle Female skeletal muscle

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Last update: Aug 31, 2015