The 2.0 version of rSNPBase

Variant report

Variant rs56771521
Chromosome Location chr1:47166911-47166912
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:47141400-47183400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr1:47143800-47171600 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr1:47154600-47183400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr1:47155600-47169000 Weak transcription Stomach Mucosa stomach
5 chr1:47157600-47172200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr1:47158200-47172000 Weak transcription Brain Angular Gyrus brain
7 chr1:47158800-47171000 Weak transcription ES-I3 Cell Line embryonic stem cell
8 chr1:47159200-47182800 Weak transcription Pancreatic Islets Pancreatic Islet
9 chr1:47159400-47171200 Weak transcription Right Ventricle heart
10 chr1:47159400-47172200 Weak transcription Psoas Muscle Psoas
11 chr1:47159600-47168200 Weak transcription HMEC breast
12 chr1:47160600-47169000 Strong transcription Primary T helper cells fromperipheralblood blood
13 chr1:47160600-47169400 Strong transcription Primary T regulatory cells fromperipheralblood blood
14 chr1:47160600-47173600 Strong transcription Primary T cells from cord blood blood
15 chr1:47160600-47174000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
16 chr1:47160600-47181200 Strong transcription Dnd41 blood
17 chr1:47160800-47168600 Strong transcription Left Ventricle heart
18 chr1:47160800-47174000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr1:47160800-47175400 Strong transcription Liver Liver
20 chr1:47160800-47181800 Strong transcription Breast Myoepithelial Primary Cells Breast
21 chr1:47160800-47182200 Strong transcription Primary B cells from cord blood blood
22 chr1:47160800-47182200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr1:47160800-47182400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr1:47160800-47182600 Strong transcription Placenta Placenta
25 chr1:47161000-47173400 Strong transcription Primary hematopoietic stem cells blood
26 chr1:47161000-47173800 Strong transcription Sigmoid Colon Sigmoid Colon
27 chr1:47161200-47182200 Strong transcription Primary B cells from peripheral blood blood
28 chr1:47161400-47182200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr1:47161400-47182800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
30 chr1:47161600-47167000 Weak transcription Gastric stomach
31 chr1:47161600-47168000 Weak transcription Pancreas Pancrea
32 chr1:47161600-47170800 Weak transcription iPS-15b Cell Line embryonic stem cell
33 chr1:47161800-47169800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr1:47161800-47170600 Weak transcription Fetal Intestine Small intestine
35 chr1:47162000-47169800 Weak transcription Placenta Amnion Placenta Amnion
36 chr1:47162200-47167000 Weak transcription HUVEC blood vessel
37 chr1:47162200-47167200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
38 chr1:47162200-47168200 Weak transcription Fetal Heart heart
39 chr1:47162200-47170000 Weak transcription Primary T killer naive cells fromperipheralblood blood
40 chr1:47162200-47170200 Weak transcription Small Intestine intestine
41 chr1:47162400-47168000 Weak transcription NHDF-Ad bronchial
42 chr1:47162400-47168200 Weak transcription Fetal Kidney kidney
43 chr1:47162400-47169200 Weak transcription Spleen Spleen
44 chr1:47162400-47169200 Weak transcription A549 lung
45 chr1:47162400-47169800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
46 chr1:47162400-47170200 Weak transcription Brain Cingulate Gyrus brain
47 chr1:47162400-47170600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
48 chr1:47162400-47170800 Weak transcription Fetal Brain Male brain
49 chr1:47162400-47171000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
50 chr1:47162600-47167000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015